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The map label for this gene is ytfB [H]

Identifier: 82546544

GI number: 82546544

Start: 4295204

End: 4295878

Strand: Direct

Name: ytfB [H]

Synonym: SBO_4239

Alternate gene names: 82546544

Gene position: 4295204-4295878 (Clockwise)

Preceding gene: 82546543

Following gene: 161984793

Centisome position: 95.03

GC content: 55.41

Gene sequence:

>675_bases
ATGATTGAGGAACAAGACGCGGAGCAGGAGGAAACCATGCCCGGGCGCTTTGAACTAAAACCAACCCTGGAGAAAGTCTG
GCACGCGCCGGACAATTTTCGCTTCATGGACCCGCTGCCGCCGATGCATCGTCGGGGGATCATTATTGCCGCCATTGTAT
TGGTGGTCGGATTTCTGCTTCCATCTGATGATACGCCCAACGCGCCGGTGGTGACGCGTGAAGCGCAGTTAGATATTCAG
TCGCAATCACAACCGCCGACAGAAGAACAGCTGCGGGCGCAATTAGTCACACCACAAAATGATCCTGATCAGGTGGCTCC
GGTCGCTCCAGAACCTATACAGGAAGGCCAGCCAGAAGAGCAGCCGCAAACTACCCAAACGCAACCATTCCAGCCAGATA
GCGGAATTGATAATCAATGGCGCTCTTACCGTGTCGAACCCGGTAAAACGATGGCGCAGCTGTTCCGCGACCACGGACTG
CCCGCTACCGATGTCTATGCAATGGCGCAGGTAGAAGGCGCGGGTAAGCCGCTGAGTAATTTGCAAAACGGGCAGATGGT
GAAAATTCGCCAGAACGCCAGCGGCGTGGTGACGGGCTTAACCATTGATACGGGGAATAATCAACAGGTCCTGTTCACCC
GCCAGCCGGATGGCAGTTTTATTCGTGCGCGGTAG

Upstream 100 bases:

>100_bases
CATCATACACTAAATCAGTAAGTTGGCAGCATTACCCCCGTATGAATATAATAAAGGCGGGTTTACCACGGACATCATAG
CGTTAGCTTATTCATAGGCT

Downstream 100 bases:

>100_bases
ATGAAGGGTCAACCAAAAGCCAGCTAAGGATTGTCTCTTTGATGACCTTACGTCTGGCTTCCAGTGCCTGGGGGGAAACC
ATACTGATATGATAAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIEEQDAEQEETMPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQ
SQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGL
PATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Sequences:

>Translated_224_residues
MIEEQDAEQEETMPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQ
SQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGL
PATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
>Mature_224_residues
MIEEQDAEQEETMPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQ
SQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGL
PATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Specific function: Unknown

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082389, Length=212, Percent_Identity=100, Blast_Score=430, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 24939; Mature: 24939

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEEQDAEQEETMPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLL
CCCCCCCCHHHCCCCEEEECHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHC
PSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEE
CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCC
QPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSN
CCCCCCCCCCCCCCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHH
LQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCEEECC
>Mature Secondary Structure
MIEEQDAEQEETMPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLL
CCCCCCCCHHHCCCCEEEECHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHC
PSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEE
CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCC
QPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSN
CCCCCCCCCCCCCCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHH
LQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]