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The map label for this gene is yjgJ [H]

Identifier: 82546503

GI number: 82546503

Start: 4247683

End: 4247937

Strand: Reverse

Name: yjgJ [H]

Synonym: SBO_4196

Alternate gene names: 82546503

Gene position: 4247937-4247683 (Counterclockwise)

Preceding gene: 82546504

Following gene: 82546502

Centisome position: 93.98

GC content: 49.02

Gene sequence:

>255_bases
ATGGTTCTTGAAGGCATTCATAGTCATGATCCACAAGCGCGTGATATTGCCGTTCAATATTATCACGCCGCAGAAACGAC
CATTTATGACTATATCGCCAGGCGGCATCCACAAAGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCAGGGC
TTTCTGCGAAGGCACGGGAGGGGCACTCCATCGAACAACTCTGTGCAACAGCTGCACTGGCGGGGGAAGCGATAAAAACT
ATTCTCAAGGAGTGA

Upstream 100 bases:

>100_bases
CGATATTCTTCGTGATGATCGTCCGGTAGGGGAGTGCCTGGCTGAGGTATTAAAAGAAGCGGCGCGCCGATATAGCCAAA
ACGGCGGCTGCGCTGGCTGT

Downstream 100 bases:

>100_bases
TGCGGGCCTTGACCCGAAAGGCGGGAACGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCG
GAATTGATCATCTTTTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKT
ILKE

Sequences:

>Translated_84_residues
MVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKT
ILKE
>Mature_84_residues
MVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKT
ILKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082397, Length=84, Percent_Identity=96.4285714285714, Blast_Score=170, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 9219; Mature: 9219

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKARE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GHSIEQLCATAALAGEAIKTILKE
CCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKARE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GHSIEQLCATAALAGEAIKTILKE
CCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]