| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yjgN [H]
Identifier: 82546498
GI number: 82546498
Start: 4244820
End: 4245065
Strand: Direct
Name: yjgN [H]
Synonym: SBO_4191
Alternate gene names: 82546498
Gene position: 4244820-4245065 (Clockwise)
Preceding gene: 82546496
Following gene: 82546500
Centisome position: 93.92
GC content: 34.55
Gene sequence:
>246_bases ATGGATTTTTTAATTCAGGGAATTTTTATGGCTCAAGTTATTAATGAAATGGATGTTCCGTCCCATTCGTTTGTTTTTCA TGGTACAGGTGAGAGATATTTTCTTATTTGTGTGGTGAATGTGTTGTTAACGATTATAACGCTAGGTATCTATTTACCAT GGGCATTAATGAAATGTAAGCGTTATCTCTATGCTAATATGGAAGTTAACGGACAACGATTTTCGGTAATGCTGCCAACT TACTGA
Upstream 100 bases:
>100_bases AAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTGTC TGTATATATAAATTATATCA
Downstream 100 bases:
>100_bases TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG CGTGGTGCGTAACGGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MDFLIQGIFMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSVMLPT Y
Sequences:
>Translated_81_residues MDFLIQGIFMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSVMLPT Y >Mature_81_residues MDFLIQGIFMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSVMLPT Y
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48995003, Length=66, Percent_Identity=100, Blast_Score=142, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 9413; Mature: 9413
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLIQGIFMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCK CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLYANMEVNGQRFSVMLPTY HHHHCCCEECCCEEEEECCCC >Mature Secondary Structure MDFLIQGIFMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCK CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLYANMEVNGQRFSVMLPTY HHHHCCCEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]