| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yjgL [H]
Identifier: 82546494
GI number: 82546494
Start: 4241811
End: 4242452
Strand: Direct
Name: yjgL [H]
Synonym: SBO_4187
Alternate gene names: 82546494
Gene position: 4241811-4242452 (Clockwise)
Preceding gene: 82546491
Following gene: 82546496
Centisome position: 93.85
GC content: 33.96
Gene sequence:
>642_bases ATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCA CGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCAAAATAGCCGTAAATTACAGGAAT TGATTTGGGATAAGTTGGTTGCATATGTCAATGATTTTAACTTAAGCAATCAAGAAAAATCACGCTTAATACTAAGGTTA TTTGATGATGTTAAGTTGCTATTTAATGAAGTGCCTGTCAGCATTTTAGTAAATGATATTTTTTTGAAGGATTTTTTCAT GAAGCAACCTGATTTTGCGAAGTGGTACTTCTATCAATTACTTAAGAAGTATGAGGGCGAACAGCTGTATCTTAATGAGT TAGGATATGTTTATGGTAATGAAGAAAAAACAAATGAAATTGTAAATAACAATCCGGGTTATGTCGTTGAGATTTTTGAA GAAAAGATGGGTAATGAATTAAAAATTAGAACAAGAATGATGGAAATCCTCCGGGATGGGAAAATAAATATATGTGAATA TATTAATAAAGAACAGTTAGAAAAATTAAATCCTCCGGAAGATTTACGTATAGCAATAAAAAAATTGGGGTGGAATAATT GA
Upstream 100 bases:
>100_bases TGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGTAGTTGCCATGTTTTACGGCAA TGAGAGCAGAGATAGCGCTG
Downstream 100 bases:
>100_bases ACTATTACTGCATAAAATAATGTGATGCCGGGATGTTTTTGTATTTCCCGGCATCTTTATTGCGATATCAATTATTTACT GAGCGTCGCGACCATCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRL FDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFE EKMGNELKIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN
Sequences:
>Translated_213_residues MSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRL FDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFE EKMGNELKIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN >Mature_212_residues SGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLF DDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEE KMGNELKIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082399, Length=171, Percent_Identity=56.7251461988304, Blast_Score=194, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24850; Mature: 24718
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLV CCCCEEEEEHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNELKIRTRMMEILRDG HHHCCCCEEEECCCCCEECCCHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCC KINICEYINKEQLEKLNPPEDLRIAIKKLGWNN CCHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLV CCCEEEEEHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNELKIRTRMMEILRDG HHHCCCCEEEECCCCCEECCCHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCC KINICEYINKEQLEKLNPPEDLRIAIKKLGWNN CCHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]