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The map label for this gene is yjgB [H]

Identifier: 82546483

GI number: 82546483

Start: 4229065

End: 4230126

Strand: Direct

Name: yjgB [H]

Synonym: SBO_4176

Alternate gene names: 82546483

Gene position: 4229065-4230126 (Clockwise)

Preceding gene: 82546481

Following gene: 82546484

Centisome position: 93.57

GC content: 54.61

Gene sequence:

>1062_bases
ATGCTCTACACTTCCCAAACAACACCAGAGAAGGACCAAAAAATGTCGATGATAAAAAGCTATGCCGCAAAAGAAGCGGG
CGGCGAACTGGAAGTTTATGAGTACGATCCCGGTGAGCTGAGGCCACAAGATGTTGAAGTGCAGGTGGATTATTGCGGGA
TCTGCCATTCCGATCTATCGATGATCGACAATGAATGGGGATTTTCACAATATCCGCTGGTTGCCGGGCATGAGGTGATT
GGGCGCGTGGTGGCACTCGGGAGCGCCGCGCAGGATAAAGGTTTGCAGGTCGGTCAGCGTGTCGGGATTGGCTGGACGGC
GCGTAGCTGTGGTCACTGCGACGCCTGTATTAGCGGTAATCAGATCAACTGCGAGCAAGGTGCGGTGCCGACGATTATGA
ATCGCGGTGGCTTTGCCGAGAAGTTGCGTGCGGACTGGCAATGGGTGATTCCACTGCCAGAAAATATTGATATCGAGTCC
GCCGGGCCGCTGTTGTGCGGCGGTATCACGGTCTTTAAACCACTGTTGATGCACCATATCACTGCTACCAGCCGCGTTGG
GGTAATTGGTATTGGCGGGCTGGGGCATATCGCTATAAAACTTCTGCACGCAATGGGATGCGAGGTGACGGCCTTTAGTT
CTAATCCGGCGAAAGAGCAGGAAGTACTGGCGATGGGTGCCGATAAAGTGGTGAATAGCCGCGATCCGCAGGCACTGAAA
GCCCTGTCGGGGCAGTTTGATCTCATTATCAATACTGTGAACGTCAGCCTCGACTGGCAGCCTTATTTTGAGGCGCTGAC
CTATGGCGGTAATTTCCATACGGTCGGTGCGGTTCTCACGCCGCTGTCTGTTCCGGCCTTTACGTTAATTGCGGGCGACC
GCAGCATCTCTGGTTCTGCTACCGGCACGCCTTATGAGCTGCGAAAGCTGATGCGCTTTGCCGCCCGTAGCAAGGTTGCG
CCGACCACCGAACTGTTCCCGATGTCGAAAATTAACGATGCCATCAAGCATGTGCGCGACGGTAAGGCGCGTTACCGCGT
GGTTCTGAAAGCCGACTTCTGA

Upstream 100 bases:

>100_bases
GCAAGCGCCAGCTTGCTCGCACCTCGCTAAGTGCTGAAATTTTCAGCATTGCACACAGCGATGTGTAACCTTTGTCACAC
TCCAGGCACCCCGCCCTGCC

Downstream 100 bases:

>100_bases
TCCCTTTGCCGGGTGCCTGTCGCCCGGCACTTAAATCTCTTTGGAAGGCGTCTCGCAATCTGCTGAATTTAGCGGTGAAG
AGTGCGCAGCCGTTGCCTAT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVI
GRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIES
AGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
ALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVA
PTTELFPMSKINDAIKHVRDGKARYRVVLKADF

Sequences:

>Translated_353_residues
MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVI
GRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIES
AGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
ALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVA
PTTELFPMSKINDAIKHVRDGKARYRVVLKADF
>Mature_353_residues
MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVI
GRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIES
AGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
ALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVA
PTTELFPMSKINDAIKHVRDGKARYRVVLKADF

Specific function: Unknown

COG id: COG1064

COG function: function code R; Zn-dependent alcohol dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082401, Length=339, Percent_Identity=99.1150442477876, Blast_Score=702, Evalue=0.0,
Organism=Escherichia coli, GI1786518, Length=347, Percent_Identity=35.4466858789625, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI87081918, Length=318, Percent_Identity=27.6729559748428, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788075, Length=342, Percent_Identity=24.5614035087719, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI226510992, Length=285, Percent_Identity=25.2631578947368, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790718, Length=325, Percent_Identity=25.8461538461538, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71988145, Length=349, Percent_Identity=28.9398280802292, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17562584, Length=341, Percent_Identity=28.1524926686217, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17562582, Length=335, Percent_Identity=27.1641791044776, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323980, Length=330, Percent_Identity=31.8181818181818, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6319949, Length=369, Percent_Identity=32.7913279132791, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6319621, Length=358, Percent_Identity=30.4469273743017, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=29.9703264094956, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6324486, Length=340, Percent_Identity=27.9411764705882, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323729, Length=336, Percent_Identity=27.3809523809524, Blast_Score=116, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR006140
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 38184; Mature: 38184

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00059 ADH_ZINC ; PS00065 D_2_HYDROXYACID_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHH
MIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGN
HHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCHHHCCCC
QINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHI
CCCCCCCCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHH
TATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
HHHCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCHHHHCCCCCHHHHH
ALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSA
HHCCCEEEEEEEEEEEECCHHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCC
TGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
CCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHH
MIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGN
HHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCHHHCCCC
QINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHI
CCCCCCCCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHH
TATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
HHHCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCHHHHCCCCCHHHHH
ALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSA
HHCCCEEEEEEEEEEEECCHHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCC
TGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
CCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]