Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82546480

Identifier: 82546480

GI number: 82546480

Start: 4224778

End: 4225857

Strand: Direct

Name: 82546480

Synonym: SBO_4172

Alternate gene names: NA

Gene position: 4224778-4225857 (Clockwise)

Preceding gene: 82546479

Following gene: 82546481

Centisome position: 93.47

GC content: 35.09

Gene sequence:

>1080_bases
ATGAATGTAGGGCATCTCAATTTCTTCAAGGTTAATAAGTGCGGTTTATACAAGGTAAATGATGACAATACCTATGGTTT
AGAACTTAGCGAAACATTTGACCTCATACAGGATTGGGTGGGAACTAAATCTCTTGCACTCACGATACCATGGGATCCAA
AAGAAAAACCAAACAGTTCAAAGTGTTATTGCAAGGATATTTATAAGGATGAAAATACTGGTGATTTCTTAGTCATGTTA
TGGAAATCTGATACTGATAGTACGGGCTCTTTATTAGGAGCTAGTGAAGACGGTGAAATCGGAAGCTCATCGGTGGTTAA
ATATACTAATAGCTACAGAGGGAAAAAAGTTATCTGGGGGCGGCCATGCTTTTATTGGGTTATACCTGAACTTGAAACTA
TAGTATCCATTAAATTCGACCATTCTGTTTGTGATTCTGAACTATTTCAAGACTATGTACACTCATCTATTACTAATAGA
GTTAAACATAGCAAAAGGGTTAAAAATAAAACCGAGAAAGGTTATATAAGGCTATCTAATACCGATGACGAAGACTTATA
TAAATATATGTACAGGTTTGATATGAAGCTCAGAAGCTTAGAAACCACTCATACTGAGTTAGGTAAACTAATACCAAAAA
TAACACACATAGTTCGCAGGGAAACTATTATTATAAATCCAAATGATGCACGAGCTGATTGGTTAAAGACCTTTAGCACT
CTCGTTCCATTTGTGTCCGGAAAGAAAAATGCCAAAACAAGACAAATTGAAATAAAAGCAGAAGCAAAACCATCCTTGAA
TGAAGTTCAAGAAATCATTGAAAAGTATTCGGCTGAGGATAGAGAAAAACGTCTTTGGGACAATGTTGGATTTGCTACAG
ACAAGGGTATAACTTGGGTGGATAAATATAGAATGCGTGATATTCTCAATGTCCCTTCTGACGACTATTCAACATATTCC
GCCGCATATATTTACGAACAAATATCACACAAAAGAAAAGAATTTATTTCCCCTATATTAAAAGAATTAAAAGCATTACA
ATCTCAACCAAGAATAAAGAAAGCATCTGGAGAGGATTGA

Upstream 100 bases:

>100_bases
CAAATTCTAGGGTGAAAACATTGCCCGCACGAAGTCAATGGGGTTATGCTTAATTTTTGATCATGATACATATCCCAAGA
TAAGAAGCTAAGGAAAGAGC

Downstream 100 bases:

>100_bases
ATATTGAAAGCTATAGCAGGCATAGCCAAATACACATGGATATACATGGCGATATTCATTATATCGCTGATGATTATTTC
GTCATCCGATATTAACTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKSLALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVML
WKSDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNR
VKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFST
LVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSDDYSTYS
AAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED

Sequences:

>Translated_359_residues
MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKSLALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVML
WKSDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNR
VKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFST
LVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSDDYSTYS
AAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED
>Mature_359_residues
MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKSLALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVML
WKSDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNR
VKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFST
LVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSDDYSTYS
AAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41561; Mature: 41561

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKSLALTIPWDPKEKPNSS
CCCCCEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
KCYCKDIYKDENTGDFLVMLWKSDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWG
CCEEEHHCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCHHEEEHHCCCCCEEEEC
RPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNRVKHSKRVKNKTEKGYIRLSN
CCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
TDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
LVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWV
HHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHH
DKYRMRDILNVPSDDYSTYSAAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKSLALTIPWDPKEKPNSS
CCCCCEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
KCYCKDIYKDENTGDFLVMLWKSDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWG
CCEEEHHCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCHHEEEHHCCCCCEEEEC
RPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNRVKHSKRVKNKTEKGYIRLSN
CCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
TDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
LVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWV
HHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHH
DKYRMRDILNVPSDDYSTYSAAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA