| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82546474
Identifier: 82546474
GI number: 82546474
Start: 4219905
End: 4220225
Strand: Reverse
Name: 82546474
Synonym: SBO_4166
Alternate gene names: NA
Gene position: 4220225-4219905 (Counterclockwise)
Preceding gene: 82546475
Following gene: 82546473
Centisome position: 93.37
GC content: 59.5
Gene sequence:
>321_bases ATGAAAACACCCTTACCGCCCGTCTTACGCGCAGCCCTTTACCGTCGTGCTGTCGCCTGTGCCTGGCTGACCGTGTGCGA ACGTCAGCACCGCTACCCGCATCTCACCCTTGAGTCACTGGAGGCGGCCATCGCCGCTGAGCTGGAAGGCTTTTATCTGC GCCAGCACGGTGAGGAAAAAGGGCGTCAGATAGCCTGTGCCCTGCTGGAAGATTTAATGGAATCCGGCCCCCTGAAGGCC GCACCGTCGCTGTCCTTTCTCGGGCTGGTTGTGATGGATGAACTCTGTGCCCGTCACATAAAAGCGCCGGTACTGCACTG A
Upstream 100 bases:
>100_bases TTCGCGCAGGGATACGCACGTCTTCAGGAGACGCAGATATGCCTTATCAGTTAATGCAACCGGCACGGAATGCAGTCATC TGTCACAGGGAGGAAAGCAA
Downstream 100 bases:
>100_bases AGGAGAACAACACCATGAAAATGAACGTAACCGCCACCGTCAGCCATGCGCTCGGCCACTGGCCGCGTATTCTCCCGGCG CTGGGGATTCAGGTGCTGAA
Product: protein encoded in prophage
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAIAAELEGFYLRQHGEEKGRQIACALLEDLMESGPLKA APSLSFLGLVVMDELCARHIKAPVLH
Sequences:
>Translated_106_residues MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAIAAELEGFYLRQHGEEKGRQIACALLEDLMESGPLKA APSLSFLGLVVMDELCARHIKAPVLH >Mature_106_residues MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAIAAELEGFYLRQHGEEKGRQIACALLEDLMESGPLKA APSLSFLGLVVMDELCARHIKAPVLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YQ55_SALTI (P68665)
Other databases:
- EMBL: AE014613 - RefSeq: NP_806366.1 - GeneID: 1067678 - GenomeReviews: AE014613_GR - KEGG: stt:t2655 - HOGENOM: HBG472706 - ProtClustDB: CLSK879606 - BioCyc: SENT209261:T2655-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11802; Mature: 11802
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAIAAELEGFYLRQHGEEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH GRQIACALLEDLMESGPLKAAPSLSFLGLVVMDELCARHIKAPVLH HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAIAAELEGFYLRQHGEEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH GRQIACALLEDLMESGPLKAAPSLSFLGLVVMDELCARHIKAPVLH HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12644504