| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is phnI [H]
Identifier: 82546435
GI number: 82546435
Start: 4168796
End: 4169854
Strand: Reverse
Name: phnI [H]
Synonym: SBO_4125
Alternate gene names: 82546435
Gene position: 4169854-4168796 (Counterclockwise)
Preceding gene: 82546436
Following gene: 82546434
Centisome position: 92.26
GC content: 60.72
Gene sequence:
>1059_bases ATGTACGTTGCCGTGAAAGGGGGCGAGAAGGAGATCGACGCCGCCCACGCCCTGCAAGAGAGCCGACGCCGGGGCAATAC CGATTTGCCTGAACTGAGCGTCGCCCAGATTGAACAGCAGCTTAATCTTGCAGTAGATCGCGTGATGACCGAAGGCGGCA TTGCCGACCGCGAACTGGCGGCGCTGGCGCTGAAACAGGCCAGCGGCGATAACGTCGAAGCGATTTTCCTGCTACGCGCC TACCGCACCACGCTGGCGAAGCTGGCGGTAAGCGAGCCGCTCGACACCACGGAGATGCGTCTCGAACGGCGTATTTCAGC GGTTTATAAAGATATTCCCGGCGGTCAGTTGCTTGGCCCAACCTACGACTACACCCATCGCCTGCTCGATTTCACCCTGC TGGCAAACGGCGAAGCGCCGACGCTGACCACCGCAGACAGCGAACAATCCCCGTCGCCGCACGTTTTCAGCCTGCTGGCG CGTCAGGGGCTGGCGAAGTTTGAAGAGGATAGCGGCGCACAGCCGGATGACATCACCCGCACTCCGCCAGTTTACCCCTG TTCACGTTCTTCCCGTTTGCAGCAGTTGATGCGCGGCGACGAAGGCTATTTGCTGGCGCTGGCCTACTCTACCCAGCGCG GTTACGGACGCAATCACCCGTTCGCGGGCGAAATCCGCAGTGGTTACATCGACGTGTCGATTATGCCGGAAGAGCTGGGA TTTGCGGTGAACGTCGGCGAACTGCTGATGACCGAGTGTGAAATGGTCAACGGTTTTATTGACCCGCCGGATGAGCCGCC GCACTTCACGCGCGGCTACGGGCTGGTGTTCGGCATGAGCGAGCGCAAAGCGATGGCGCTGGTTGACCGTGCGTTGCAGG CTCCGGAGTACGGCGAGCACGCGACAGGCCCGGCGCAGGATGAAGAGTTCGTGCTGGCACATGCCGACAACGTCGAAGCC GCAGGCTTTGTCTCGCACCTCAAACTCCCCCACTACGTCGATTTCCAGGCCGAACTGGAGCTACTCAAACGTCTGCAACA GGAGCAGAACCATGGCTAA
Upstream 100 bases:
>100_bases CCGAGCGCCCGCACCCGTTCCCGCTCGGCATCGACCTGATCCTGACCTGCGGCGAGCGGCTGCTGGCTATCCCGCGAACC ACTCATGTGGAGGTGTGCTG
Downstream 100 bases:
>100_bases TCTGAGCGGCTACAACTTTGCCTACCTCGACGAGCAGACCAAACGCATGATCCGCCGCGCCATCTTAAAAGCGGTGGCGA TCCCCGGTTATCAGGTGCCG
Product: PhnI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRA YRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIMPEELG FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEA AGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
Sequences:
>Translated_352_residues MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRA YRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIMPEELG FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEA AGFVSHLKLPHYVDFQAELELLKRLQQEQNHG >Mature_352_residues MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRA YRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIMPEELG FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEA AGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=354, Percent_Identity=97.7401129943503, Blast_Score=700, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 38829; Mature: 38829
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGP HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLARQGLAKFEEDSGAQPDDITR CHHHHHHHHHEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIMPEELG CCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHHC FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMALVDRALQAPEYGEH CEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC ATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG CCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGP HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLARQGLAKFEEDSGAQPDDITR CHHHHHHHHHEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIMPEELG CCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHHC FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMALVDRALQAPEYGEH CEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC ATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG CCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]