Click here to switch to the map view.

The map label for this gene is yjbR [H]

Identifier: 82546400

GI number: 82546400

Start: 4127597

End: 4127953

Strand: Direct

Name: yjbR [H]

Synonym: SBO_4086

Alternate gene names: 82546400

Gene position: 4127597-4127953 (Clockwise)

Preceding gene: 82546399

Following gene: 82546402

Centisome position: 91.32

GC content: 50.14

Gene sequence:

>357_bases
ATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACTAGGCGCAGAACAGAGCGTGCATAACGACTGGAAAGCGAC
GCAGATCAAAGTGGAAGATGTACTGTTTGCGATGGTGAAAGAAGTAGAAAATCGCCCAGCTGTTTCGCTGAAAACCAGCC
CGGAGCTGGCGGAGCTGCTACGTCAGCAGCACAGCGATGTGCGTCCTAGCCGCCATCTGAATAAAGCGCACTGGAGCACC
GTGTATCTCGACGGTTCGCTGCCGGATTCGCAAATCTATTATCTGGTGGATGCGTCTTATCAGCAGGCAGTGAATTTACT
ACCGGAAGAAAAGCGTAAATTGCTGGTACAACTCTGA

Upstream 100 bases:

>100_bases
GCGTATTCAGACCGGCACCTGGCAAGGCATCTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGA
CACTACAAGGGGAGTAAAAA

Downstream 100 bases:

>100_bases
AAGGAAAAGGCCGCTCAGAAAGCGGCCTTAACGATTACAGCATCGGCTTGAGGAAGCGTGCCGTATGCGAAGCTTCGCAC
TCCGCGACGGTTTCTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWST
VYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL

Sequences:

>Translated_118_residues
MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWST
VYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL
>Mature_117_residues
TISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTV
YLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367342, Length=118, Percent_Identity=99.1525423728814, Blast_Score=239, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 13536; Mature: 13404

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELL
CCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
RQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL
HHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
TISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELL
CHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
RQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL
HHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]