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The map label for this gene is yjbF [H]

Identifier: 82546370

GI number: 82546370

Start: 4099066

End: 4099734

Strand: Direct

Name: yjbF [H]

Synonym: SBO_4055

Alternate gene names: 82546370

Gene position: 4099066-4099734 (Clockwise)

Preceding gene: 82546369

Following gene: 82546371

Centisome position: 90.69

GC content: 54.11

Gene sequence:

>669_bases
GTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGCTATTACAGGCCTGTTC
AGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGACGATGATA
TTCAAAATATGCCCTACGCCAGCCAGTACATGCAGCTTAATGGCGGGCCGCAATTGTTTGTGGTGCTGGCCTTCGCTGAA
GACGGACAACAAAAATGGGTCACTCAGGATCAAGCCACTCTTGTCACACAACATGGTCGTCTGGTGAAGATTTTGCTTGG
CGGCGACAACCTGATTGAAGTGAATAACCTTGCCGCCGACCCGCTGATTAAACCCGCACAAATTGTTGATGGTGCAACAT
GGACGCGCACGATGGGCTGGACCGAGTACCAGCAGGTACGCTACGCCACCGCACGCTCAGTCTTCAAATGGGATGGCACC
GATACCGTCAAAGTCGGCAGCGATGAAACCCTGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCA
TAACCGCTACTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTCCCGGTGAAAA
CCACTCTCATCAAGGCGGCAAAACAATGA

Upstream 100 bases:

>100_bases
CCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTTGAGTCATTGCATCTGTGGCTTGAAGTATGAAGGGATT
TACCATAACCACACTCCGGT

Downstream 100 bases:

>100_bases
TTAAACAAACTTTTGTCGCGTTGCTTTTGAGTGTGGGAGCGTCATCGGTCTTCGCGGCAGGAACCGTCAAGGTGTTCAGC
AATGGCAGCAGTGAGGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVILPLWRRVVKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAE
DGQQKWVTQDQATLVTQHGRLVKILLGGDNLIEVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGT
DTVKVGSDETLVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ

Sequences:

>Translated_222_residues
MVILPLWRRVVKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAE
DGQQKWVTQDQATLVTQHGRLVKILLGGDNLIEVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGT
DTVKVGSDETLVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
>Mature_222_residues
MVILPLWRRVVKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAE
DGQQKWVTQDQATLVTQHGRLVKILLGGDNLIEVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGT
DTVKVGSDETLVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcC [H]

Homologues:

Organism=Escherichia coli, GI87082360, Length=212, Percent_Identity=98.1132075471698, Blast_Score=428, Evalue=1e-121,
Organism=Escherichia coli, GI1787221, Length=212, Percent_Identity=38.6792452830189, Blast_Score=160, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 25030; Mature: 25030

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILPLWRRVVKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYA
CEEHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCH
SQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKILLGGDNLIEVNNLAAD
HHHEEECCCCEEEEEEEECCCCCHHHCCCCHHHEEECCCCEEEEEECCCCEEEECCCCCC
PLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETLVRVLDEEVS
CCCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHHHHHHHHC
TDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
CCHHHHCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVILPLWRRVVKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYA
CEEHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCH
SQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKILLGGDNLIEVNNLAAD
HHHEEECCCCEEEEEEEECCCCCHHHCCCCHHHEEECCCCEEEEEECCCCEEEECCCCCC
PLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETLVRVLDEEVS
CCCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHHHHHHHHC
TDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
CCHHHHCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]