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The map label for this gene is rhsA [H]

Identifier: 82546286

GI number: 82546286

Start: 3980961

End: 3983744

Strand: Direct

Name: rhsA [H]

Synonym: SBO_3954

Alternate gene names: 82546286

Gene position: 3980961-3983744 (Clockwise)

Preceding gene: 82546285

Following gene: 82546287

Centisome position: 88.08

GC content: 61.46

Gene sequence:

>2784_bases
ATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCG
CATTGGTACCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCG
GTGCAAAGGTCCTTCCCGGTGAAACCGGCATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGT
TACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCG
CGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACA
GCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAG
GCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGG
CTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGG
ACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGT
GCCGGGCGTCACTTCCAACTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGG
GACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCG
TGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCGCGCGGC
GAACTGGCGGCAGTGTATGACCGCAGCAATACACAGGTGCGTAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGT
GGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTTAACCCGG
CAGGCTTAAGCTACACGTATCAGTATGAGAAGGACCGCATCACCATCACCGACAGCCTGAACCGCCGTGAAGTGCTGCAC
ACGCAGGGTGAAGCCGGGCTGAAGCGGGTGGTGAAAAATCACCCGGAGACGGAAGCACTGCTCTGGCAGCATGAGACCAG
ACATGCGTACAACGCGCAGGGACTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCA
GCGGCTGGCTGGCAGGTATGAAGCTCGGCGACACACCGCTGGTGGATTTCACCCGCGACCGCCTGCACCGGGAAACGCTG
CGCCGCTTCGGCCGTTATGAACTCTCCACCGCTTACACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCA
GTATGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCT
ACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAACCTTGATATCCGCATCCTGTATGCCACAGACCCG
GCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGA
CGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGGTATCCGCA
CGGATGATGAGCGCACCCACTGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAG
CCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGGCGGCGTGAACGGGACCT
GACGGGCTGGATGTCGCTGTCACGGAAACCGGAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGA
ACGACAGAACCCGCATCCAGACGGTTTATCAGCCGGGAAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAG
CTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC
GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGC
TGGCATCGTGCGGCCTGACCGTGGCGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATTCACCTG
TACCACTGCGACCATCGCGGCCTGCCGCTGGTGCTTATCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGA
GTGGGGCAACCTGCTGAATGAAGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGGCAGCAGTATGATGAGG
AGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGGCTG
AAGGGGGGATGGAATTTTTATCAGTATCCGCTGAGCCCGGTGAATAGCATGGATCCATTAGGATTATATGAATTTAAATC
AAAAAATATAGATGATATTGGAATATTTGCATTGGCAATGTGGGTAATGCTGCCAACTTACTGA

Upstream 100 bases:

>100_bases
TATAAATTCTGAAAAATTCCGGGGTGTTAACTCATTATCATTTCCTGTTGTTGACTGGCGCTAGGCTTCTGGTTCTTATT
TATTTCAAAAGGATTTTACG

Downstream 100 bases:

>100_bases
TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG
CGTGGTGCGTAACGGCAAAA

Product: protein in rhs element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 927; Mature: 926

Protein sequence:

>927_residues
MSGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETGIALPGPLPFILSRTYSS
YRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQ
ALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG
AGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRG
ELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLH
TQGEAGLKRVVKNHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETL
RRFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRILYATDP
AGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAE
PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVETATGE
LAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHL
YHCDHRGLPLVLISTEGATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL
KGGWNFYQYPLSPVNSMDPLGLYEFKSKNIDDIGIFALAMWVMLPTY

Sequences:

>Translated_927_residues
MSGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETGIALPGPLPFILSRTYSS
YRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQ
ALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG
AGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRG
ELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLH
TQGEAGLKRVVKNHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETL
RRFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRILYATDP
AGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAE
PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVETATGE
LAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHL
YHCDHRGLPLVLISTEGATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL
KGGWNFYQYPLSPVNSMDPLGLYEFKSKNIDDIGIFALAMWVMLPTY
>Mature_926_residues
SGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETGIALPGPLPFILSRTYSSY
RTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQA
LPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGA
GRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGE
LAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLHT
QGEAGLKRVVKNHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETLR
RFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRILYATDPA
GNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAEP
LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVETATGEL
AKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHLY
HCDHRGLPLVLISTEGATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK
GGWNFYQYPLSPVNSMDPLGLYEFKSKNIDDIGIFALAMWVMLPTY

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1790020, Length=709, Percent_Identity=72.0733427362482, Blast_Score=970, Evalue=0.0,
Organism=Escherichia coli, GI48994942, Length=706, Percent_Identity=71.671388101983, Blast_Score=962, Evalue=0.0,
Organism=Escherichia coli, GI1786917, Length=557, Percent_Identity=84.91921005386, Blast_Score=958, Evalue=0.0,
Organism=Escherichia coli, GI1786706, Length=720, Percent_Identity=60.1388888888889, Blast_Score=809, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 105163; Mature: 105032

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVTSGHPVNPLLGAKVLPG
CCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCCCHHHCCEECCC
ETGIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCE
LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ
EEEEEECCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCC
GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG
CCEEEEHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECC
AGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCC
EYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYR
CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCEEEE
YDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEAGLKRVVKNHPETEAL
ECCCCCEECCCCCCCCEEEEEECCCEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCHHH
LWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETL
EEEHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHH
RRFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRL
HHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEE
TGVHTTAANLDIRILYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRL
EEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHEEECCCCCC
TEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVETATGE
HHHHCCCHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCH
LAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT
HHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEGATEWCAEYDEWGNLLNEENPHHL
HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH
QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLSPVNSMDPL
HHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCC
GLYEFKSKNIDDIGIFALAMWVMLPTY
CEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVTSGHPVNPLLGAKVLPG
CCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCCCHHHCCEECCC
ETGIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCE
LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ
EEEEEECCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHCCHHHCCCCCEEEECCCCC
GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG
CCEEEEHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECC
AGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCC
EYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYR
CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCEEEE
YDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEAGLKRVVKNHPETEAL
ECCCCCEECCCCCCCCEEEEEECCCEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCHHH
LWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETL
EEEHHHCCCCCCCCHHHHCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHH
RRFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRL
HHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEE
TGVHTTAANLDIRILYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRL
EEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHEEECCCCCC
TEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVETATGE
HHHHCCCHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCH
LAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT
HHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEGATEWCAEYDEWGNLLNEENPHHL
HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH
QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLSPVNSMDPL
HHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCC
GLYEFKSKNIDDIGIFALAMWVMLPTY
CEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2403547; 8041620; 9278503; 7934896 [H]