| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is wecC [H]
Identifier: 82546142
GI number: 82546142
Start: 3820746
End: 3822008
Strand: Direct
Name: wecC [H]
Synonym: SBO_3798
Alternate gene names: 82546142
Gene position: 3820746-3822008 (Clockwise)
Preceding gene: 82546141
Following gene: 82546143
Centisome position: 84.53
GC content: 53.92
Gene sequence:
>1263_bases ATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTACATCGGGCTGCCTACAGCAGCAGCGTTTGCCTCACGGCAAAA ACAGGTGATTGGTGTCGATATCAACCAACACGCGGTTGATACCATCAATCGTGGCGAAATCCATATCGTCGAGCCTGATT TGGCGAGCGTAGTAAAAACTGCCGTAGAAGGCGGTTTTTTACGAGCGAGCACGACGCCAGTTGAAGCGGATGCCTGGCTG ATTGCTGTACCCACGCCGTTTAAAGGCGATCATGAGCCAGATATGACCTACGTTGAATCGGCTGCTCGCTCCATTGCGCC AGTGCTGAAAAAAGGCGCGCTGGTGATCCTTGAATCCACCTCGCCGGTGGGGTCAACCGAGAAGATGGCAGAATGGTTAG CAGAGATGCGTCCGGATCTCACTTTCCCACAGCAGGTGGGCGAGCAGGCGGACGTCAACATTGCTTACTGCCCGGAACGC GTGTTACCGGGCCAGGTTATGGTCGAGCTGATTAAAAACGATCGCGTGATTGGTGGTATGACGCCGGTTTGTTCGACCCG CGCCAGCGAACTGTACAAAATTTTCCTCGAAGGTGAGTGTGTCGTCACTAACTCGCGGACGGCGGAAATGTGTAAGCTCA CCGAAAACAGCTTCCGCGATGTGAATATCGCTTTTGCTAATGAATTGTCGCTGATTTGTGCCGATCAGGGGATTAACGTC TGGGAACTGATTCGCCTGGCGAATCGTCACCCTCGCGTTAATATTCTTCAGCCTGGCCCTGGCGTGGGCGGTCACTGCAT TGCTGTTGATCCGTGGTTTATCGTGGCACAGAACCCCCAGCAGGCGCGGCTTATCCGTACCGCGCGCGAAGTGAACGATC ACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAA CTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA ACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGC TTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGTGCTGGTGATGCTGGTCGATCATAGTCAGTTTAAA GTTATCAATGGCGACAATGTCCATCAGCAGTATGTCGTCGATGCCAAAGGAGTCTGGCGCTGA
Upstream 100 bases:
>100_bases AAAACGAATATCAAACTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTA AAAAATAATCGGATATCACT
Downstream 100 bases:
>100_bases TGAGAAAAATTCTGATAACAGGTGGTGCCGGGTTTATTGGCTCGGCGCTGGTGCGTTATATCATCAACGAAACGAGCGAC GCGGTGGTAGTGGTCGATAA
Product: UDP-N-acetyl-D-mannosamine dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWL IAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASE LKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFK VINGDNVHQQYVVDAKGVWR
Sequences:
>Translated_420_residues MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWL IAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASE LKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFK VINGDNVHQQYVVDAKGVWR >Mature_419_residues SFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLI AVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERV LPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINVW ELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASEL KIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKV INGDNVHQQYVVDAKGVWR
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=457, Percent_Identity=26.6958424507659, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI296040438, Length=358, Percent_Identity=25.1396648044693, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI48994968, Length=420, Percent_Identity=99.7619047619048, Blast_Score=863, Evalue=0.0, Organism=Escherichia coli, GI1788340, Length=376, Percent_Identity=23.6702127659574, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560350, Length=437, Percent_Identity=28.8329519450801, Blast_Score=121, Evalue=6e-28, Organism=Drosophila melanogaster, GI17136908, Length=370, Percent_Identity=27.5675675675676, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 45869; Mature: 45738
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKT CCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHCCCCCCEEEEECCHHHHHHHH AVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILEST HHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC SPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGM CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEECCC TPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV CCHHHHHHHHEEEEEECCEEEEECCCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVI HHHHHHHCCCCCEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEH DQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCEEEE EPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure SFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKT CEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHCCCCCCEEEEECCHHHHHHHH AVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILEST HHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC SPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGM CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEECCC TPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV CCHHHHHHHHEEEEEECCEEEEECCCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVI HHHHHHHCCCCCEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEH DQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCEEEE EPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]