Click here to switch to the map view.

The map label for this gene is yidF [H]

Identifier: 82546052

GI number: 82546052

Start: 3710311

End: 3710808

Strand: Direct

Name: yidF [H]

Synonym: SBO_3695

Alternate gene names: 82546052

Gene position: 3710311-3710808 (Clockwise)

Preceding gene: 82546051

Following gene: 82546054

Centisome position: 82.09

GC content: 54.02

Gene sequence:

>498_bases
ATGACAGGAAGTCAGGTCATTGATGCTGAAGAGGACAGGCATAAACTGGTTGTAGAGTACAAGGATGCTCTGCAACCTGC
CGATTTTTATCACAATTTCAAACAGCGGGGCATCCGCTCCGTACAGCTCATTCCCTATCTTGAATTTGATGACCGGGGCG
ATCTGACGGCCGCTTCGGTGACAGCAGAGCTGTGGGGGAAATTTTTAATTGCCCTGTTCGAGTGTTGGGTGCGGGCAGAT
ATCAGTCGTATCTCGATTGAGCTTTTTGACGCCACCTTACAAAAATGGTGTGGCGGCGAAAACCCGCAACCGCGCCGTGA
CTGCCAGGCGTGCGACTGGCATCGCCTGTGCCCGCACGCTCGGCAGGAGACGCCAGACAGCGTGCTTTGTGCGGGCTATC
AGGCGTTTTATTCTTACTCCGCACCGCATATGCGGGTGATGCGTGATCTGATAAAGCAGCATCGTTCTCCCATGGAGCTG
ATGACGATGCTGCGGTGA

Upstream 100 bases:

>100_bases
TCCGTGACAAATTTTTGATCTCCCTCGCGGTGTTATCTCTCGCAATACTGTTTGCTGTAACGCATATACATCAACTTATC
GTATTTATTGAGAGAGTCGC

Downstream 100 bases:

>100_bases
CGTGCGCTTAAACGGGCTGCCCCTGATGCGACATCCGCGTCGCCAGCGGCAGCCAGCACAGCACGATCAACAATCCCATT
AAGGTCATCAATAACCCCAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASVTAELWGKFLIALFECWVRAD
ISRISIELFDATLQKWCGGENPQPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
MTMLR

Sequences:

>Translated_165_residues
MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASVTAELWGKFLIALFECWVRAD
ISRISIELFDATLQKWCGGENPQPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
MTMLR
>Mature_164_residues
TGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADI
SRISIELFDATLQKWCGGENPQPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELM
TMLR

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790108, Length=165, Percent_Identity=98.7878787878788, Blast_Score=342, Evalue=5e-96,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19211; Mature: 19080

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASV
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHH
TAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENPQPRRDCQACDWHRLCPHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCCCC
RQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
TGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASV
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHH
TAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENPQPRRDCQACDWHRLCPHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCCCC
RQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]