Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yiaH

Identifier: 82545932

GI number: 82545932

Start: 3575024

End: 3576019

Strand: Direct

Name: yiaH

Synonym: SBO_3569

Alternate gene names: 82545932

Gene position: 3575024-3576019 (Clockwise)

Preceding gene: 82545931

Following gene: 82545937

Centisome position: 79.1

GC content: 46.79

Gene sequence:

>996_bases
ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCACACCACTACCTG
GTATGTGACCAATGCTCATAGTGTTAGCCCCGTCACATGGGATATCGCCAATGTTCTGAATTCTGCCTCTCGTGTCAGCG
TGCCGCTATTTTTCATGATTTCCGGCTATCTCTTTTTTGGCGAACGCAGCGCCCAGCCGCGCCATTTCTTGCGTATCGGC
TTATGTCTGATTTTTTATAGCGCAATCGCACTGCTCTACATTGCGCTGTTTACCTCCATCAATATGGAGTTAGCGCTGAA
AAACCTGCTGCAAAAGCCAGTGTTTTACCACTTGTGGTTTTTCTTCGCGATTGCGGTGATTTATCTGGTTTCACCGCTGA
TTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTGCTAATGGCGGTGATTGGCATTATCGCTAACCCAAACACAGTG
CCGCAGAAAATTGACGGTTTTGAATGGCTGCCAATTAACTTATATATCAATGGCGATACTTTTTACTACATTCTGTATGG
CATGTTGGGCCGCGCTATAGGGATGATGGACACACAGCATAAAGCACTGTCGTGGGTGAGCGCCGCGCTGTTTGCGACGG
GGGTTTTTATTATCTCTCGCGGGACATTATATGAATTGCAGTGGCGCGGAAATTTTGCCGATACCTGGTATCTTTACTGT
GGGCCGATGGTTTTTATCTGCGCAATCGCGCTATTGACTCTGGTTAAAAACACGCTGGATACGCGTACCATTCGCGGACT
TGGCTTAATCTCCCGCCATTCATTGGGTATATACGGATTCCACGCCTTGATTATCCATGCGCTGCGCACCCGGGGAATTG
AGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTG
GTACAACGAATCGACAGAAACAGATTAGTGAGTTAA

Upstream 100 bases:

>100_bases
GAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGT
AAGTTGGAGTCATTACCCAG

Downstream 100 bases:

>100_bases
GTAAAAGCCCGTTCACATTGGACTGACCGGGCTTACGTGAATTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTT
TGGCGGGTTTATTCCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG
LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV
PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC
GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML
VQRIDRNRLVS

Sequences:

>Translated_331_residues
MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG
LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV
PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC
GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML
VQRIDRNRLVS
>Mature_331_residues
MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG
LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV
PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC
GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML
VQRIDRNRLVS

Specific function: Unknown

COG id: COG3274

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family

Homologues:

Organism=Escherichia coli, GI1789984, Length=331, Percent_Identity=100, Blast_Score=673, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIAH_ECOLI (P37669)

Other databases:

- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S47782
- RefSeq:   AP_004231.1
- RefSeq:   NP_418018.1
- ProteinModelPortal:   P37669
- DIP:   DIP-12403N
- MINT:   MINT-1289754
- STRING:   P37669
- EnsemblBacteria:   EBESCT00000003766
- EnsemblBacteria:   EBESCT00000017233
- GeneID:   948077
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3533
- KEGG:   eco:b3561
- EchoBASE:   EB2183
- EcoGene:   EG12274
- eggNOG:   COG3274
- GeneTree:   EBGT00050000011401
- HOGENOM:   HBG417181
- OMA:   GWIDNLR
- ProtClustDB:   CLSK880723
- BioCyc:   EcoCyc:EG12274-MONOMER
- BRENDA:   3.1.8.1
- Genevestigator:   P37669
- InterPro:   IPR002656

Pfam domain/function: PF01757 Acyl_transf_3

EC number: NA

Molecular weight: Translated: 37570; Mature: 37570

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c8cea30)-; HASH(0x176dfe5c)-; HASH(0x1c939f20)-; HASH(0x1b3a22b8)-; HASH(0x1cb59078)-; HASH(0x1a22577c)-; HASH(0x1c83d328)-; HASH(0x1c72e8a0)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI
CCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCHHHCHHHHHHH
SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCH
FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHH
GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH
LDIIWIFCATLAASLLLSMLVQRIDRNRLVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI
CCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCHHHCHHHHHHH
SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCH
FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHH
GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH
LDIIWIFCATLAASLLLSMLVQRIDRNRLVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503