| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yiaH
Identifier: 82545932
GI number: 82545932
Start: 3575024
End: 3576019
Strand: Direct
Name: yiaH
Synonym: SBO_3569
Alternate gene names: 82545932
Gene position: 3575024-3576019 (Clockwise)
Preceding gene: 82545931
Following gene: 82545937
Centisome position: 79.1
GC content: 46.79
Gene sequence:
>996_bases ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCACACCACTACCTG GTATGTGACCAATGCTCATAGTGTTAGCCCCGTCACATGGGATATCGCCAATGTTCTGAATTCTGCCTCTCGTGTCAGCG TGCCGCTATTTTTCATGATTTCCGGCTATCTCTTTTTTGGCGAACGCAGCGCCCAGCCGCGCCATTTCTTGCGTATCGGC TTATGTCTGATTTTTTATAGCGCAATCGCACTGCTCTACATTGCGCTGTTTACCTCCATCAATATGGAGTTAGCGCTGAA AAACCTGCTGCAAAAGCCAGTGTTTTACCACTTGTGGTTTTTCTTCGCGATTGCGGTGATTTATCTGGTTTCACCGCTGA TTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTGCTAATGGCGGTGATTGGCATTATCGCTAACCCAAACACAGTG CCGCAGAAAATTGACGGTTTTGAATGGCTGCCAATTAACTTATATATCAATGGCGATACTTTTTACTACATTCTGTATGG CATGTTGGGCCGCGCTATAGGGATGATGGACACACAGCATAAAGCACTGTCGTGGGTGAGCGCCGCGCTGTTTGCGACGG GGGTTTTTATTATCTCTCGCGGGACATTATATGAATTGCAGTGGCGCGGAAATTTTGCCGATACCTGGTATCTTTACTGT GGGCCGATGGTTTTTATCTGCGCAATCGCGCTATTGACTCTGGTTAAAAACACGCTGGATACGCGTACCATTCGCGGACT TGGCTTAATCTCCCGCCATTCATTGGGTATATACGGATTCCACGCCTTGATTATCCATGCGCTGCGCACCCGGGGAATTG AGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTG GTACAACGAATCGACAGAAACAGATTAGTGAGTTAA
Upstream 100 bases:
>100_bases GAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGT AAGTTGGAGTCATTACCCAG
Downstream 100 bases:
>100_bases GTAAAAGCCCGTTCACATTGGACTGACCGGGCTTACGTGAATTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTT TGGCGGGTTTATTCCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML VQRIDRNRLVS
Sequences:
>Translated_331_residues MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML VQRIDRNRLVS >Mature_331_residues MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIG LCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTV PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSML VQRIDRNRLVS
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family
Homologues:
Organism=Escherichia coli, GI1789984, Length=331, Percent_Identity=100, Blast_Score=673, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YIAH_ECOLI (P37669)
Other databases:
- EMBL: U00039 - EMBL: U00096 - EMBL: AP009048 - PIR: S47782 - RefSeq: AP_004231.1 - RefSeq: NP_418018.1 - ProteinModelPortal: P37669 - DIP: DIP-12403N - MINT: MINT-1289754 - STRING: P37669 - EnsemblBacteria: EBESCT00000003766 - EnsemblBacteria: EBESCT00000017233 - GeneID: 948077 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW3533 - KEGG: eco:b3561 - EchoBASE: EB2183 - EcoGene: EG12274 - eggNOG: COG3274 - GeneTree: EBGT00050000011401 - HOGENOM: HBG417181 - OMA: GWIDNLR - ProtClustDB: CLSK880723 - BioCyc: EcoCyc:EG12274-MONOMER - BRENDA: 3.1.8.1 - Genevestigator: P37669 - InterPro: IPR002656
Pfam domain/function: PF01757 Acyl_transf_3
EC number: NA
Molecular weight: Translated: 37570; Mature: 37570
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c8cea30)-; HASH(0x176dfe5c)-; HASH(0x1c939f20)-; HASH(0x1b3a22b8)-; HASH(0x1cb59078)-; HASH(0x1a22577c)-; HASH(0x1c83d328)-; HASH(0x1c72e8a0)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI CCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCHHHCHHHHHHH SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCH FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHH GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH LDIIWIFCATLAASLLLSMLVQRIDRNRLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI CCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCHHHCHHHHHHH SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEEECCCH FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHH GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH LDIIWIFCATLAASLLLSMLVQRIDRNRLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503