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The map label for this gene is yhjS [H]

Identifier: 82545900

GI number: 82545900

Start: 3542069

End: 3543640

Strand: Direct

Name: yhjS [H]

Synonym: SBO_3535

Alternate gene names: 82545900

Gene position: 3542069-3543640 (Clockwise)

Preceding gene: 82545890

Following gene: 82545901

Centisome position: 78.37

GC content: 48.92

Gene sequence:

>1572_bases
ATGAGGGACATTGTGGGCCCTGTATTCTCTATCGGTATCTCATCATTATGGGATGAGCTGCGACATATGCCAGCAGGCGG
CGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCG
CACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTATCAAGGGCCGGAAAAAATA
AAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAA
TTACCTTTTTATTCTTGTTTGCGCAAATAACGCATGGCAAAACATTCCTGCCGAGCGGCTTCGCTCATGGTTGGATAAAA
TGAATAAATGGAGCAGGTTAACCCATTGTTCGCTTTTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTG
TTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGCCAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTT
CTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGCAGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAA
GCGAAGAGGCGGAGATCCAACCACGCAGCGACGAAAAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCG
CTATCGGAACACTGGCAACTGTTCAACAATAACGAAGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGT
CTTTTCTTTACAGCAAAATGCGCAAATCGAGCCACTGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGA
TGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTGCGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATG
GTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCTGACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGT
GCCGGAAGATATAACTACCTTGCTGTCAATGACCCAGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTA
ATGCCGTCAACAACATGATGAATAACCCTCTATTACCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCG
GGTATCCGCGTTGAACAAGCCCTGACGCTGTGTCGCCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCT
GGTGCTGTTTCTCTCATTCTGTCGGATTAACGATCTGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACA
TTTTCTCAAACCGTATGGTCTGGTTTGAAGATGATCAAATCAGTGCCGAGCTGGTGCAGATGCGCCTGCTTGCCCCAGAA
CAATGGGGCATGCCGCTGCCTTTAACGCAAAGTTCTAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACG
AATACCAGAACCCATGCGACTGTTAGATGATGCTGTGGAGCGCTCATCATGA

Upstream 100 bases:

>100_bases
CTAAATTGATTCACATGCTAAATCTGATAAGTTTTAATTTCAATGGTAGGTTTATTTCTTAGCTTTCGCTAGTAAACTGA
TAATCAGACAAAATGGTGAC

Downstream 100 bases:

>100_bases
TGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCT
TTGCGACGCATTCGCGACAC

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKI
KLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Sequences:

>Translated_523_residues
MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKI
KLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
>Mature_523_residues
MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKI
KLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789958, Length=523, Percent_Identity=99.4263862332696, Blast_Score=1071, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017745 [H]

Pfam domain/function: PF10995 DUF2819 [H]

EC number: NA

Molecular weight: Translated: 59434; Mature: 59434

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
MDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQ
ECCCCCEEEEECCCCCCCCEEHHHHHCCCCCEEEEEECCEEEECCCCEEEEEEECCCCCC
NIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE
HHHHHHEECCCEEEEECCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP
CCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCH
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
HCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
MDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQ
ECCCCCEEEEECCCCCCCCEEHHHHHCCCCCEEEEEECCEEEECCCCEEEEEEECCCCCC
NIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE
HHHHHHEECCCEEEEECCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP
CCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCH
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
HCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]