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The map label for this gene is ygaV [C]

Identifier: 82545868

GI number: 82545868

Start: 3495756

End: 3496052

Strand: Reverse

Name: ygaV [C]

Synonym: SBO_3502

Alternate gene names: 82545868

Gene position: 3496052-3495756 (Counterclockwise)

Preceding gene: 82545869

Following gene: 82545862

Centisome position: 77.35

GC content: 48.82

Gene sequence:

>297_bases
ATGCAGTTGGAAGAAGTCGCTAAAGCGCTGAAAGAGCTAGGTCACCCGACCCGTTTGTTCATATTTAAACATCTTGTCAA
AGCCGGGGAACAAGGGTTGCCGGTCGGTGAGTTGCAAAAGCAGCTTGGGATACCTGGCTCCACACTCAGCCACCATATAT
CAGCACTGGTATCGGTAGGACTGGTCAAACAAAACCGTGAGAGTCGGACGCTGATGTGTGTTTCGCAATACGCAATGCTG
GAAGCGATAATTGAATTCTTACGCGAGGAGTGCTGCGTAAATAGCAAAATTGCCTGA

Upstream 100 bases:

>100_bases
CCTCATTGGATAAATCTATATTTCCAGAATAATCGAAATGAAATTCAGATCAAGATATTTCTGGTATTATCGAAATATCA
ACCAGACAGAGGGGTGTCAT

Downstream 100 bases:

>100_bases
TGCGCTACGCTCTACATATTTCATGCCATATATTGAATTTGCACGGTTTTGTAGGTCGGATAAGACGCGTTAGCGTCGCA
TCCGACATAAACAAAGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Regulatory Protein Arsr; ArsR Family Regulatory Protein; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR; Transcription Regulator Protein; Transcriptional Regulator ArsR; Arsenical Resistance Transcriptional Regulator; Arsenical Resistance Transcriptional Regulator Arsr

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKIA

Sequences:

>Translated_98_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKIA
>Mature_98_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKIA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10842; Mature: 10842

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA