| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is malQ [H]
Identifier: 82545773
GI number: 82545773
Start: 3390774
End: 3392858
Strand: Reverse
Name: malQ [H]
Synonym: SBO_3405
Alternate gene names: 82545773
Gene position: 3392858-3390774 (Counterclockwise)
Preceding gene: 82545774
Following gene: 82545770
Centisome position: 75.07
GC content: 54.87
Gene sequence:
>2085_bases ATGGAAAGCAAACGTCTGGATAATGCCGCGCTGGCGGCGGGGATTAGCCCCAATTACATCAATGCCCACGGTAAACCGCA GTCGATTAGCGCCGAAACCAAACGGCGTTTGCTTGACGCGATGCATCAACGTACCGCCACGAAAGTGGCGGTAACGCCAG TCCCGAATGTCATGGTTTATACCAGCGGCAAAAAAATGCCGATGGTGGTGGAGGGCAGCGGCGAATATAGCTGGCTGCTG ACCACCGAAGAAGGAACACAGTACAAAGGCCATGTAACGGGGGGCAAAGCGTTCAATCTACCGACGAAGCTGCCGGAAGG TTATCACACGCTGACACTCACCCAGGACGACCAGCGCGCGCATTGCCGGGTGATTGTCGCCCCGAAACGCTGTTACGAAC CGCAGGCGTTGCTGAATAAACAAAAGCTGTGGGGTGCCTGCGTTCAGCTTTATACGCTGCGATCGGAAAAAAACTGGGGT ATTGGGGATTTTGGCGATCTCAAAGCGATGCTGGTGGATGTGGCAAAACGTGGCGGGTCGTTCATCGGCCTGAACCCGAT TCATGCGCTCTATCCGGCAAATCCGGAGAGTGCCAGCCCATACAGTCCGTCTTCTCGCCGTTGGCTGAATGTGATTTATA TCGACGTTAACGCCGTTGAAGATTTCCATCTTAGCGAAGAGGCTCAGGCCTGGTGGCAGTTGCCGACCACGCAACAGACG CTGCAACAGGCGCGCGATGCCGACTGGGTCGATTACTCCACGGTTACCGCCCTAAAAATGACAGCATTACGAATGGCGTG GAAAGGTTTCGCGCAACGTGATGATGAGCAGATGACCGCGTTTCGCCAGTTTGTTGCAGAGCAGGGCGACAGCCTGTTCT GGCAGGCAGCCTTTGATGCGCTACATGCCCAGCAAGTGAAAGAGGACGAAATGCGCTGGGGCTGGCCTGCATGGCCAGAG ATGTATCAGAACGTGGATTCACCAGAAGTGCGTCAGTTCTGCGAAGAACATCGTGATGACGTCGATTTTTATCTCTGGTT GCAGTGGCTGGCTTACAGCCAGTTTGCCGCCTGCTGGGAGATAAGCCAGGGCTATGAAATGCCGATTGGCTTGTATCGTG ATCTGGCGGTTGGCGTAGCGGAAGGTGGGGCGGAAACCTGGTGTGACCGTGAACTATATTGCCTGAAAGCGTCGGTTGGC GCGCCGCCGGATATCCTCGGCCCGTTGGGGCAGAACTGGGGATTACCGCCAATGGACCCGCATATCATCACCGCGCGTGC CTATGAACCGTTTATCGAGCTGTTGCGTGCCAATATGCAAAACTGCGGCGCATTACGAATTGACCATGTGATGTCGATGC TGCGTTTGTGGTGGATACCGTATGGCGAGACGGCAGATCAGGGCGCGTATGTTCACTATCCGGTGGATGATCTGCTCTCG ATTCTGGCACTCGAAAGTAAACGTCATCGCTGTATGGTGATTGGTGAAGATCTCGGTACCGTACCGGTAGAGATTGTCGG TAAGCTGCGCAGCAGCGGTGTGTACTCCTACAAAGTGCTCTATTTCGAAAACGACCACGAGAAGACGTTCCGTGCACCGA AAGCGTATCCGGAGCAGTCGATGGCGGTTGCGGCGACACATGACCTGCCTACGCTGCGCGGTTACTGGGAGAGCGGGGAT CTAACGTTGGGCAAAACCCTAGGGCTGTATCCGGATGAAGTGGTACTGCGCGGTCTGTATCAGGATCGCGAACTGGCGAA GCAAGGGCTGCTGGATGCACTGCATAAATATGGTTGTCTGCCAAAACGTGCCGGGCATAAGGCATCGTTGATGTCGATGA CGCCGACGCTTAATCGTGGTTTGCAGCGCTACATTGCCGACAGTAACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG CTGGATATGGCCGAACCGGTGAATATTCCTGGCACCAGTTACCAGTATAAAAACTGGCGACGCAAGCTTTCCGCAACGCT TGAGACGATGTTTGCCGATGATGGCGTGAATAAGTTGCTGAAGGATTTGGACAGACGGCGCAGAGCTGCAGCGAAGAAGC AGTAG
Upstream 100 bases:
>100_bases GGCGATCCTCAATACCGCCCGCTGCGGTATGTTTAGCTCGGATCGCTCTATTCGCGATTATCAGGCTCGTATCTGGCAGG CAAAACGCTAAGGAAGCTCG
Downstream 100 bases:
>100_bases AGTGCGGTTGATGCCGGATGCGATGCATCCGGCAGTCAGTGTTATCAAATCACCATATTCAGCAGCAGACAGCCTACCAG ACCGCACACCGAGATAATGG
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLL TTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPE MYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVG APPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGD LTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDW LDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKDLDRRRRAAAKKQ
Sequences:
>Translated_694_residues MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLL TTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPE MYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVG APPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGD LTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDW LDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKDLDRRRRAAAKKQ >Mature_694_residues MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLL TTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPE MYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVG APPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGD LTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDW LDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKDLDRRRRAAAKKQ
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=694, Percent_Identity=99.4236311239193, Blast_Score=1437, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 78532; Mature: 78532
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY CCCCCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEE TSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRA ECCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCCC HCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGS CEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC FIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT EEECCCHHEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCHHHH LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHH LHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWE HHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCC HIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS CEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHH ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQS HHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHCCCCCCCCCC MAVAATHDLPTLRGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCL EEEEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWR CCCCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHH RKLSATLETMFADDGVNKLLKDLDRRRRAAAKKQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY CCCCCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEE TSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRA ECCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCCC HCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGS CEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC FIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT EEECCCHHEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCHHHH LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHH LHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWE HHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCC HIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS CEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHH ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQS HHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHCCCCCCCCCC MAVAATHDLPTLRGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCL EEEEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWR CCCCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHH RKLSATLETMFADDGVNKLLKDLDRRRRAAAKKQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2845225; 9278503 [H]