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The map label for this gene is yhfK [H]

Identifier: 82545709

GI number: 82545709

Start: 3326324

End: 3327637

Strand: Direct

Name: yhfK [H]

Synonym: SBO_3340

Alternate gene names: 82545709

Gene position: 3326324-3327637 (Clockwise)

Preceding gene: 82545708

Following gene: 82545715

Centisome position: 73.59

GC content: 53.42

Gene sequence:

>1314_bases
ATGCGGAAGAAGTTATCCGCTGGAATGCGCAAACCGTCGCCGCTCGCCTGCGCGTGCTGGCTGATGACATTCTTTACCAT
CGCCTGCCAACGCGTTTTACGATGGAAAAGCAAATTGGCGCACTGGAAAAAATCGCCCGCCAGCATCCGGATAATCCGGT
TGGGCAATTCTGCTACTGGCATTTCAGCCGCATCGCCCGCGTGCTGCGCACCCAAAAACCGCTCTATGCCCGTGACTTAC
TGGCCGATAAACACGCGGCGAATGCCATTACTTCCTGCGCTGAAAAGTTATCTGTCACTAAAGTCTCCGGCGCTACGCAA
TGCCGGACGACTCAGTGTGATGTTAAGCGTTGCCAGCCTGATGGGCACCGCGCTGCATCTGCCGAAGTCGTACTGGATCC
TGATGACGGTATTGCTGGTGACACAAAATGGCTATGGCGCAACCCGTCTGAGGATTGTGAATCGCTCCGTGGGAACCGTG
GTCGGGTTAATCATTGCGGGCGTGGCGCTGCACTTTAAAATTCCCGAAGGTTACACCCTGACGTTGATGCTGATTACCAC
CCTCGCCAGCTACCTGATATTGCGCAAAAACTACGGCTGGGCGACGGTCGGTTTTACTATTACCGCAGTGTATACCCTGC
AACTATTGTGGTTGAACGGCGAGCAATACATCCTTCCGCGTCTTATCGATACCATTATTGGTTGTTTAATTGCTTTCGGC
GGTACTGTCTGGCTGTGGCCGCAGTGGCAGAGCGGGTTATTGCGTAAAAACGCCCATGACGCTTTAGAAGCCTATCAGGA
AGCGATTCGCTTGATTCTTAGCGAGGATCCGCAACCTACGCCACTGGCCTGGCAGCGAATGCGGGTAAATCAGGCACATA
ACACTCTGTATAACTCATTGAATCAGGCGATGCAGGAACCGGCGTTTAACAGCCATTATCTGGCAGATATGAAACTGTGG
GTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGA
ACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTATGACGAACCGGGTA
GTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTA
CAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGATGGCATGGCGTCAGCGACCGCATCACGGGATTTG
GCTGAGTCGCAAGTTGCGGGATTCGAAGGCGTAA

Upstream 100 bases:

>100_bases
CGGATGCTGCGTATTTTCCAGGAGGCGCTGGATTTACAGGAACATATTTCGGTCAGTTTGCATCAGCCGGAAGAGGTGCA
AAAGCTGGTCGAGCGTAGCC

Downstream 100 bases:

>100_bases
TACAGGCTAAACCATCGGATAAGGCATTCACGCCGCATCCGACATATTTTGCCTGATGCGTCTTATTTACGCCCCAACCA
CCTTCGCCACCGCGTGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MRKKLSAGMRKPSPLACACWLMTFFTIACQRVLRWKSKLAHWKKSPASIRIIRLGNSATGISAASPACCAPKNRSMPVTY
WPINTRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTV
VGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFG
GTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLW
VTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHL
QRVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA

Sequences:

>Translated_437_residues
MRKKLSAGMRKPSPLACACWLMTFFTIACQRVLRWKSKLAHWKKSPASIRIIRLGNSATGISAASPACCAPKNRSMPVTY
WPINTRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTV
VGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFG
GTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLW
VTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHL
QRVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA
>Mature_437_residues
MRKKLSAGMRKPSPLACACWLMTFFTIACQRVLRWKSKLAHWKKSPASIRIIRLGNSATGISAASPACCAPKNRSMPVTY
WPINTRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTV
VGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFG
GTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLW
VTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHL
QRVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87082248, Length=352, Percent_Identity=100, Blast_Score=722, Evalue=0.0,
Organism=Escherichia coli, GI87081808, Length=205, Percent_Identity=33.6585365853659, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726
- InterPro:   IPR010020 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 49222; Mature: 49222

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLSAGMRKPSPLACACWLMTFFTIACQRVLRWKSKLAHWKKSPASIRIIRLGNSATG
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
ISAASPACCAPKNRSMPVTYWPINTRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASL
CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHH
MGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTL
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCH
TLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFG
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHC
GTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSL
CCEEECCCHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
NQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAI
HHHHHCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPHHGIWLSRKLRDSKA
CCCCCCEEHHHHCCCCC
>Mature Secondary Structure
MRKKLSAGMRKPSPLACACWLMTFFTIACQRVLRWKSKLAHWKKSPASIRIIRLGNSATG
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
ISAASPACCAPKNRSMPVTYWPINTRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASL
CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHH
MGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTL
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCH
TLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFG
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHC
GTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSL
CCEEECCCHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
NQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAI
HHHHHCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPHHGIWLSRKLRDSKA
CCCCCCEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]