Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yheT [H]

Identifier: 82545702

GI number: 82545702

Start: 3319158

End: 3320180

Strand: Direct

Name: yheT [H]

Synonym: SBO_3333

Alternate gene names: 82545702

Gene position: 3319158-3320180 (Clockwise)

Preceding gene: 82545701

Following gene: 82545703

Centisome position: 73.44

GC content: 53.76

Gene sequence:

>1023_bases
ATGGCGCAGATAACGACGACCGATGCCAATGAATTCAGCAGCAGTGCTGAATTCACCCCTATGCGCGGCTTTAGCAATTG
TCATCTACAAACTATGCTGCCGCGTTTGTTTCGTCGTCAGGTGAAATTCACCCCGTACTGGCAGCGGCTGGAGTTGCCCG
ACGGCGATTTTGTCGATCTCGCGTGGAGTGAAGCCCCTGCACAGGCTCGGCATAAACCGCGTTTAGTGATATTTCACGGG
CTGGAAGGCAGTCTCAATAGCCCTTACGCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCGGCTGGCTGGGCGTGGTGAT
GCATTTTCGCGGATGCAGCGGTGAACCAAACCGTATGCACCGCATTTACCATTCGGGCGAAACCGAAGACGCCAGTTGGT
TTTTACGCTGGCTGCAACGCGAATTTGGTCATGCGCCAACGGCTGCCGTCGGCTATTCGCTCGGCGGTAATATGCTGGCC
TGTTTGCTGGCAAAGGAAGGCAATGATCTCCCGGTTGATGCGGCGGTGATTGTCTCTGCGCCGTTTATGCTGGAAGCCTG
TAGCTATCATATGGAAAAGGGCTTTTCCCGCGTTTATCAGCGTTACTTGCTGAACCTGTTAAAAGCCAATGCCGCGCGCA
AGCTGGCAGCCTACCCCGGAACGCTGCCGATTAATCTCGCGCAGTTAAAATCGGTACGTCGCATCCGTGAATTTGACGAT
CTAATCACCGCCAGAATTCACGGCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCG
GATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTC
TCCCCTCGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGCGGTACATTACTTCATCCGCAA
ATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAATCATGTTGA

Upstream 100 bases:

>100_bases
AGCAAGCCAGCGCCAAATCCGGCCTGGAAGAGTGCGAAATGGCGTGGCTGGAAGCCCAGGAGCAGCTTGAGCAGATGCTG
CTGGAAGGCCAAAGCAACTG

Downstream 100 bases:

>100_bases
TTCCGTGGCAAGACCTCTCCCCCGAAACGCTGGAAAATTTAATTGAAAGCTTTGTGTTACGTGAAGGCACCGATTATGGT
GAACATGAGCGTACACTTGA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHG
LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDD
LITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQ
MWLESRIPDWLTTYLEAKSC

Sequences:

>Translated_340_residues
MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHG
LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDD
LITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQ
MWLESRIPDWLTTYLEAKSC
>Mature_339_residues
AQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGL
EGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLAC
LLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDL
ITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQM
WLESRIPDWLTTYLEAKSC

Specific function: Unknown

COG id: COG0429

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]

Homologues:

Organism=Homo sapiens, GI194578891, Length=321, Percent_Identity=28.3489096573209, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI23397663, Length=274, Percent_Identity=27.7372262773723, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI23397659, Length=326, Percent_Identity=26.0736196319018, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI23397661, Length=326, Percent_Identity=26.0736196319018, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI269315865, Length=314, Percent_Identity=26.1146496815287, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789752, Length=340, Percent_Identity=98.5294117647059, Blast_Score=704, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17566110, Length=306, Percent_Identity=26.1437908496732, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71985405, Length=305, Percent_Identity=23.9344262295082, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325162, Length=290, Percent_Identity=30.3448275862069, Blast_Score=109, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6323866, Length=246, Percent_Identity=30.4878048780488, Blast_Score=106, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6319655, Length=287, Percent_Identity=27.8745644599303, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24652003, Length=295, Percent_Identity=30.8474576271186, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI281398151, Length=295, Percent_Identity=30.8474576271186, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24581365, Length=322, Percent_Identity=23.2919254658385, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012020
- InterPro:   IPR000073
- InterPro:   IPR000952 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 38473; Mature: 38341

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS01133 UPF0017

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDL
CCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEEE
AWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMH
ECCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHH
RIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSA
HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCC
PFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPSQVEY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
QLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEAKSC
HHHHCCCEEEEECCHHHCHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDL
CEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEEE
AWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMH
ECCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHH
RIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSA
HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCC
PFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPSQVEY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH
QLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEAKSC
HHHHCCCEEEEECCHHHCHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]