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The map label for this gene is yhcH [H]

Identifier: 82545549

GI number: 82545549

Start: 3172996

End: 3173460

Strand: Direct

Name: yhcH [H]

Synonym: SBO_3168

Alternate gene names: 82545549

Gene position: 3172996-3173460 (Clockwise)

Preceding gene: 161984852

Following gene: 82545552

Centisome position: 70.2

GC content: 47.53

Gene sequence:

>465_bases
ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCTGGGTTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGC
TGCCAGACCGCAAGAAAAAGCGCCTGGTCGTTACGAATTACAGGGCGACAATATCTTTATGAATGTCATGACGTTTAACA
CTCAATCGCCCGTCGAGAAAAAAGCGGAATTGCACGAGCAATACATTGATATCCAGCTGTTATTAAACGGTGAGGAACGG
ATTCTGTTTGGCATGGCAGGCACTGCGCGCCAGTGTGAAGAGTTCCACCATGAGGATGATTATCAGCTTTGCAGCACCAT
TGATAACGAGCAAGCCATCATCTTAAAACCGGGAATGTTCGCCGTGTTTATGCCAAGTGAACCGCATAAACCAGGATGCG
TTGTCGGCGAGCCGGGTGAGATTAAAAAGGTGGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA

Upstream 100 bases:

>100_bases
CGCAGGAGCCAGCGGCATTTCATGTTGATTTACTGGCGGCGCACTACCGCCACGATGCAGGTTTACTTGGGGCTGCGCTG
TTGGCCCAGGGAGAAAAATT

Downstream 100 bases:

>100_bases
ATTTATTAGATCAGGTGTGACCTGACCCATCTTTGGCACAGAGCCAAACCTGAACTGACGGACCGCTCTGTGCCATTACC
TGACGTTGTATTCTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA

Sequences:

>Translated_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA
>Mature_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0227 [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=154, Percent_Identity=99.3506493506494, Blast_Score=317, Evalue=2e-88,
Organism=Escherichia coli, GI1790001, Length=149, Percent_Identity=31.5436241610738, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI87082398, Length=148, Percent_Identity=29.7297297297297, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17068; Mature: 17068

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCEE
AVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA
EEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCEE
AVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA
EEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]