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The map label for this gene is gspH

Identifier: 82545405

GI number: 82545405

Start: 3017264

End: 3017731

Strand: Direct

Name: gspH

Synonym: SBO_3016

Alternate gene names: NA

Gene position: 3017264-3017731 (Clockwise)

Preceding gene: 82545404

Following gene: 82545406

Centisome position: 66.76

GC content: 54.91

Gene sequence:

>468_bases
ATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACAGACGTTTGCGACCGATTCTGAACCGCCCGCGAA
AAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACAGGGCAGTGATTGAAGGACAGACACTCGGTGTGC
TAATCGACCCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAGTGGTTGCCCGTTTCTGCGACCCGGTTATCGGCA
CAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAGTGATATCTGGCAGAAGGAATATGCGCTGGAGCT
GCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGTTGCAAAAAGAGGCGAAAAAGAAGACGCCGCAGATCCGTT
TTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCGGCGGCGCAAAACGCATGTTGA

Upstream 100 bases:

>100_bases
TCAGGAAAACGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAAGCAGTGCCTGAACGCG
GATTCACACTTCTGGAAATC

Downstream 100 bases:

>100_bases
GCGGTAAAGCTGGCACACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCCATGAAGCGCGGATTTACCTTG
CTGGAAGTGATGCTCGTGCT

Product: type II secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNAC

Sequences:

>Translated_155_residues
MLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNAC
>Mature_155_residues
MLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17551; Mature: 17551

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGY
CEEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCH
QFMQRRQGQWLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELE
HHHHHCCCCCCCEEHHHEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNAC
HHHHHHHCCCCEEECCCCCCCCEEEEEECHHCCCC
>Mature Secondary Structure
MLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGY
CEEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCH
QFMQRRQGQWLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELE
HHHHHCCCCCCCEEHHHEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNAC
HHHHHHHCCCCEEECCCCCCCCEEEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA