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The map label for this gene is ygiRQ [H]

Identifier: 82545277

GI number: 82545277

Start: 2879726

End: 2881945

Strand: Reverse

Name: ygiRQ [H]

Synonym: SBO_2878

Alternate gene names: 82545277

Gene position: 2881945-2879726 (Counterclockwise)

Preceding gene: 82545278

Following gene: 82545275

Centisome position: 63.76

GC content: 54.41

Gene sequence:

>2220_bases
ATGAGCTCTATCTCCCTGATCCAACCGGATCGCGACCTGTTCTCCTGGCCGCAGTACTGGGCCGCCTGTTTTGGACCGGC
ACCGTTTTTGCCGATGTCTAGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATCATTTTGGTTACTGGCGACG
CGTATGTCGATCACCCAAGCTTCGGGATGGCGATTTGCGGTCGTATGCTGGAAGCGCAGGGCTTTCGCGTCGGGATCATC
GCCCAGCCGGACTGGAGCAGCAAAGACGACTTTATGCGTCTGGGTAAACCGAATCTGTTTTTCGGTGTTACTGCTGGCAA
CATGGATTCGATGATCAACCGTTATACCGCCGATCGCCGTTTACGTCATGACGATGCCTACACGCCGGATAACGTCGCGG
GTAAGCGCCCGGATCGCGCCACACTGGTTTATACCCAGCGTTGTAAAGAGGCGTGGAAAGATGTACCGGTGATCCTCGGC
GGTATTGAGGCTAGTCTGCGTCGTACCGCACATTATGATTACTGGTCCGATACCGTGCGCCGTTCCGTGCTGGTGGATTC
GAAAGCCGACATGCTGATGTTTGGTAACGGTGAGCGTCCGCTGGTGGAGGTGGCGCACCGTCTGGCGATGGGCGAGCCGA
TTAGTGAAATCCGCGATGTGCGTAATACCGCGATTATCGTGAAAGAGGCCCTGCCTGGCTGGAGCGGCGTGGATTCCACC
CGTCTTGATACCCCTGGAAAAATCGACCCAATCCCGCATCCGTATGGTGAAGATTTGCCGTGCGCGGATAACAAACCGGT
GGCACCGAAAAAGCAGGAAGCCAAAGCCGTAACCGTGCAGCCACCGCGCCCGAAACCGTGGGAAAAAACCTACGTGTTGC
TGCCTTCTTTCGAGAAAGTGAAGGGCGATAAAGTGCTGTACGCCCATGCTTCGCGTATTCTGCACCACGAAACCAACCCA
GGCTGTGCCCGCGCATTGATGCAAAAACACGGCGACCGCTATGTGTGGATCAACCCGCCTGCTATTCCGCTTTCTACCGA
AGAGATGGACAGCGTTTTTGCGCTGCCATACAAGCGCGTGCTACATCCGGCCTATGGCAATGTCCGTATTCCGGCTTACG
AAATGATCCGTTTTTCGGTCAACATTATGCGTGGCTGCTTTGGCGGCTGCTCTTTCTGTTCTATCACCGAGCACGAAGGG
CGCATTATTCAGAGCCGTTCCGAAGATTCGATCATTAATGAGATCGAAGCGATCCGCGACACCGTTCCAGGTTTTACGGG
CGTAATTTCCGATCTCGGTGGGCCAACTGCCAACATGTATATGTTGCGCTGCAAATCGCCACGCGCTGAGCAAACCTGCC
GCCGTTTGTCGTGCGTTTATCCGGATATTTGTCCGCACATGGACACGAACCACGAACCAACGATCAACCTCTATCGCCGT
GCGCGTGATCTGAAAGGCATTAAAAAGATCCTGATTGCCTCTGGTGTGCGTTATGACATCGCCGTGGAAGATCCGCGCTA
TATCAAAGAACTGGCGACCCATCACGTCGGCGGTTATCTGAAGATTGCCCCGGAACATACCGAAGAAGGGCCGTTATCGA
AGATGATGAAGCCGGGCATGGGCAGCTATGACCGCTTTAAAGAGCTGTTCGATACTTACTCAAAACAGGCAGGTAAAGAG
CAGTATCTGATCCCCTATTTCATCTCCGCGCACCCCGGTACGCGTGATGAAGATATGGTGAATCTGGCGCTGTGGCTGAA
AAAGCATCGTTTCCGTCTCGACCAGGTACAGAACTTCTACCCATCGCCGCTGGCGAACTCAACCACCATGTATTACACCG
GGAAAAAACCGCTGGCGAAGATTGGTTATAAGAGTGAAGACGTCTTCGTACCGAAGGGCGACAAGCAGCGTCGTTTGCAT
AAAGCGTTGTTGCGTTACCACGATCCGGCAAACTGGCCGTTAATCCGCCAGGCGCTGGAAGCGATGGGTAAAAAGCATCT
GATTGGTAGCCGTCGCGATTGCTTAGTGCCTGCGCCAACCATTGAAGAGATGCGTGAAGCTCGTCGCCAGAACCGCAATA
CCCGTCCGGCGTTGACGAAACATACGCCGATGGCGACCCAGCGTCAGACGCCTGCTACGGCAAAAAAAGCGTCGTCTACG
CAATCTCGTCCGGTGAATGCTGGTGCGAAGAAACGGCCTAAAGCGGCGGTTGGACGTTAA

Upstream 100 bases:

>100_bases
CGCCCGAGGAGGGCGAGTATGGAATACTTTTCGATTTCTCTTTCGTTCCGGCTTATAATCCCCGGCCTTTGATTATTTTT
TTATCATTTCTGGAAGCAAA

Downstream 100 bases:

>100_bases
ATTCGCTGTTCCCGGTAGCAGAATTGCTACCGGGGATATTACATCAGAATCTATCTCATTAGGCATTTATTTATATGCCG
AAATGGGTAATGCTGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEDVFVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST
QSRPVNAGAKKRPKAAVGR

Sequences:

>Translated_739_residues
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEDVFVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST
QSRPVNAGAKKRPKAAVGR
>Mature_738_residues
SSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIA
QPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGG
IEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTR
LDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPG
CARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGR
IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA
RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ
YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYKSEDVFVPKGDKQRRLHK
ALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQ
SRPVNAGAKKRPKAAVGR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=739, Percent_Identity=99.4587280108254, Blast_Score=1532, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 83468; Mature: 83337

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHH
LHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
HCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKKPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
QSRPVNAGAKKRPKAAVGR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHH
LHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
HCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKKPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
QSRPVNAGAKKRPKAAVGR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]