Click here to switch to the map view.

The map label for this gene is 82545242

Identifier: 82545242

GI number: 82545242

Start: 2847760

End: 2848959

Strand: Direct

Name: 82545242

Synonym: SBO_2840

Alternate gene names: NA

Gene position: 2847760-2848959 (Clockwise)

Preceding gene: 82545232

Following gene: 82545249

Centisome position: 63.01

GC content: 57.25

Gene sequence:

>1200_bases
ATGTTGTCCGCTTTTACTCCCCGCCCGCTGAAACGTCTGTTCACGGCCAACCAGTGCTGGACATCCTTCCTGGATGCGGG
CGGTCTGCGCGATATCGGGGTTGAGGCTGTCACAAAAATGCTGGCCTGCGGCACGCGGATACTGGGAGTGAAGGAATACA
TCTGCGATAAACCTGAGTGCCCCCACGTCAGATACGTCACTAACTCATGCGGCAGCCGTGCCTGCCCGTCCTGCGGAAAA
AAGGCCACAGACCTGTGGATAGCGACACAGCTGAATCGTCTTCCTGACTGCGACTGGGTACACCTGGTCTTCACCCTGCC
GGACACGCTGTGGCCGGTGTTCGAAAGCAACCGGTGGCTGCTGAATGACGTGTGCCGTCTGGCGGTGGAGAATCTGCTGT
ATGCCGCCCGGAAACGGGGGCAGGAACCCGGTATCTTCTGCGCCATCCACACGTATGGCCGTCGTCTCAACTGGCATCCG
CATGTACATGTGTCTGTAACCTGTGGAGGTCTGAATAAGCATGGTCAGTGGAAAAAGCTGAGCTTCCTGAAAGACGCGAT
GCGTTCACGGTGGATGTGGAATATGCGGCAGCTGCTTCTGAAAGCGTGGTCAGAGGGGCTGGCGATGCCGGAGTCGTTGT
CACATATCACGACGGAATCACAGTGGAGAAGCCTGGTGCTGAAAGCCGGAGGAAAATACTGGCATGTGTACATGTCGAAA
AAAACGGCCGGCGGGAGGAATACGGCGCGCTACCTGGGTCGTTATCTGAAGAAGCCGCCGATAGCGGCCTCCCGGCTGGC
ACATTACAACGGAGGGGCGAGCTTGAACTTCCGTTACCTGGACCACAAAACGGGAGAAACGGCGACGGAAACGCTGACAC
AGCGTGAGCTGGTCGCGAGGCTGAAACAGCACATCCCGGAGAAGTTTTTTAAGATGGTGAGGTACTTCGGGTTCCTTGCC
AACCGGGTGTGTGGAGAGAAGCTGCCGCAGGTGTACCGTGCTCTGGGGATGGATAAACCGGAACCAGTGGCGAAAGTGTG
CTATGCACAAATAGTGAAACAGTTCCTGAGTCGTGACCCGTTCGAATGCGTGCTGTGTGGCGGCCGGATGGTATACCGCC
GGGCCATTGCGGGACTGAATGTGGAGGGGCTGAAGAAAAACGCGCGGGATATCAGTCTGCTGAGGTATATGCCGGCCTGA

Upstream 100 bases:

>100_bases
GGACCCACCACCTGCGATGGTCGCGGCCTCCATCCTGGAGCGCCGTGGCGACACAGCAGCCCTTACCCGGCTACAGGATA
CCGGGGGTTAATCCGTCCTC

Downstream 100 bases:

>100_bases
CACAGGCTAAGTGTGCCCGGGAATCGGTGCAAGTATAAAAAACAGCCTGTTGCGGTATAAGAATCGACCATGCAGAGAGA
GAAAACACCGGAGTGGAGGG

Product: IS1294 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQIVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA

Sequences:

>Translated_399_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQIVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
>Mature_399_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQIVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 45546; Mature: 45546

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPEC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC
PHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWL
CCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHCCCCHH
LNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCCHHHH
SFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVAR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQIVKQFLSRDP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
FECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
CEEEEECCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPEC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC
PHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWL
CCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHCCCCHH
LNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCCHHHH
SFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVAR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQIVKQFLSRDP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
FECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
CEEEEECCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1646375 [H]