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The map label for this gene is ygcI [C]

Identifier: 82545170

GI number: 82545170

Start: 2772866

End: 2773612

Strand: Direct

Name: ygcI [C]

Synonym: SBO_2763

Alternate gene names: 82545170

Gene position: 2772866-2773612 (Clockwise)

Preceding gene: 82545169

Following gene: 82545171

Centisome position: 61.35

GC content: 54.48

Gene sequence:

>747_bases
ATGAGCCAATATCTGATTTTTCAGCTTCATGGGCCGATGGCATCCTGGGGCGTCGATGCCCCCGGCGAAGTGCGTCATAC
CCATGAACTGCCTTCGCTCTCAGCATTGCTGGGGCTGCTGGCTGCCGGGGTAGGGATCCGGCGTGATGATACCGAACGCT
TAAACGCGTTTAATCGCCACTATTCACTGGTGGTTTGCGCCAGCCGTAACCCGCGCTGGGCACGGGATTATCACACGGTC
CAGATGCCAAAAGAGGTGCGTAAAGCACGTTATTTCAGCCGTCGCGAAGAGTTGAGCGACCCTGAGCTTTTGAGCGCGAT
TATCTCCCGGCGCGACTACTACACCGATGCCTGGTGGATGGTGGCGGTGGCAACAACAGCCGATGCGCCTTACAGCCTCG
AACAGTTGCAGGACGGTTTACGCCATCCAGTTTTTCCGCTTTATCTGGGGCGAAAAAGTCATCCGCTGGCATTACCTCTT
GCGCCGTTACTGCTCGAAGGCAACGCGTGTGATGCCTTATGTAATGCATACCAACAGTATCAGGATCATTTCCATAAACT
GAAAGTTTCACTCCCGAAACTTCAGGATGAATGCTGGTGGGAAGGGAAACACGACGGCCTGGTCGCGAGCAAAATATTAC
GCCGCCGGGATGTTCCTTTAAATCGTCAGCAGTGGCTGTTTGGGGAACGCACCGTCAATCAGGGGCCGTGGCTCAGCAAG
GAGGAACCATGTACCTCTCAAGAATAA

Upstream 100 bases:

>100_bases
GTCTACGAACAGAAGACCGATTACGCAAGTTTTGACGTGATGAACAAACAGGGAAGCATGAAGGACGTGCTGGACTTTAT
CTGCGCGTAAGGGGCGGCTT

Downstream 100 bases:

>100_bases
CCTTACATACCGGCCAGCTTTCGCCTGCGCAGTTGCTGCATCTGGTGGATCGCGGTGAATATGTGATGCATCAGTGGCTG
TGGGATCTCTTCCCTAGCGG

Product: cytoplasmic protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5e Family Protein; CRISPR-Associated Cas5 Family Protein; Cytoplasmic Protein; CRISPR-Associated Protein; CRISPR-Associated E; Complete Genome; Crispr-Associated Protein Cas5e-Type; CRISPR-Associated Protein CT; CRISPR-Associated Subtype

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTV
QMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK
EEPCTSQE

Sequences:

>Translated_248_residues
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTV
QMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK
EEPCTSQE
>Mature_247_residues
SQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQ
MPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLA
PLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKE
EPCTSQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082154, Length=168, Percent_Identity=33.9285714285714, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28559; Mature: 28428

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRH
CCCEEEEEECCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWM
EEEEEECCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQY
EEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
QDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC
EEPCTSQE
CCCCCCCC
>Mature Secondary Structure 
SQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRH
CCEEEEEECCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWM
EEEEEECCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQY
EEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
QDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC
EEPCTSQE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA