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The map label for this gene is ygdI [H]

Identifier: 82545107

GI number: 82545107

Start: 2699546

End: 2699776

Strand: Reverse

Name: ygdI [H]

Synonym: SBO_2692

Alternate gene names: 82545107

Gene position: 2699776-2699546 (Counterclockwise)

Preceding gene: 82545110

Following gene: 82545106

Centisome position: 59.73

GC content: 46.32

Gene sequence:

>231_bases
ATGATGAAAAAGACTGCCGCAATTATTTCTGCCTGTATGCTGACTTTTGCCCTGAGCGCCTGTTCCGGTTCGAACTATGT
GATGCACACCAATGACGGACGTACCATCGTCTCTGACGGCAAACCACAGACTGATAACGATACCGGTATGATTTCGTATA
AAGACGCTAATGGCAACAAACAGCAGATCAACCGTACTGACGTGAAAGAGATGGTCGAACTGGATCAGTAA

Upstream 100 bases:

>100_bases
TGGCGAAGCCGCGTAAGTAACATATGCTGAATAGTGTTAGGCGTTAATTTTAGCCTGTTAATCAATACTATTAAGATTTA
TTAATCGCTTTAAGGAGAAG

Downstream 100 bases:

>100_bases
TTCGCGATCGCAAGGTAAAAAAAAGCACCGCAATTAGGCGGTGCTACATTAATCACTATGGACAGACAGGGTAAATGTAC
AGGAAGTGAAAAAAGGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ

Sequences:

>Translated_76_residues
MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ
>Mature_76_residues
MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygdR [H]

Homologues:

Organism=Escherichia coli, GI87082162, Length=75, Percent_Identity=100, Blast_Score=157, Evalue=2e-40,
Organism=Escherichia coli, GI1789198, Length=72, Percent_Identity=59.7222222222222, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010305 [H]

Pfam domain/function: PF06004 DUF903 [H]

EC number: NA

Molecular weight: Translated: 8306; Mature: 8306

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNK
CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCH
QQINRTDVKEMVELDQ
HHCCHHHHHHHHHCCC
>Mature Secondary Structure
MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNK
CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCH
QQINRTDVKEMVELDQ
HHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]