| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ygcG [H]
Identifier: 82545075
GI number: 82545075
Start: 2661153
End: 2661857
Strand: Direct
Name: ygcG [H]
Synonym: SBO_2657
Alternate gene names: 82545075
Gene position: 2661153-2661857 (Clockwise)
Preceding gene: 82545073
Following gene: 82545085
Centisome position: 58.88
GC content: 41.56
Gene sequence:
>705_bases GTGCAAATTGCTGTATTAATTGTTCCCACAACCAAAGACGAGACAATTGAACAATATGCTACAAGAGTTTTTGACAATTG GCGTTTAGGAGATGCCAAACGTAATGATGGGATACTGATCATTGTTGCCTGGTCAGATCGTACTGTCCGCATCCAGGTAG GTTATGGGCTGGAAGAAAAGGTAACCGATGCTCTGGCTGGAGATATCATCCGTAGCAACATGATACCCGCATTTAAACAA CAAAAATTTGCTCAGGGATTAGAGCTAGCTATAAACGCTTTGAATAACCAACTCACTTCACAACACCAATATCCGACTAA TCCTTCAGAAAGTGAATCAGCGTCTTCCAGTGATCATTATTACTTTGCTATTTTTTGGGTATTTGCAGTGATGTTCTTCC CTTTCTGGTTTTTTCATCAAGGCAGTAATTTTTGTCGCGCATGTAAAAGTGGAGTCTGTATTTCAGCAATCTATCTTTTA GATTTATTCCTGTTCTCCGATAAAATTTTTTCCATTGCTGTATTTTCCTTCTTTTTTACTTTCACCATATTTATGGTCTT TACCTGTTTATGTGTACTTCAGAAAAGAGCATCAGGTAAAAGTTATCATTCAGACAACAGCGGTTCCGGTGGAGGCTCAA GTGGCGGCGGATTTAGCGGCGGTGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGCCGCTGGTAA
Upstream 100 bases:
>100_bases ACAATTACAGTAACAAGTTACGGATCTTACGAGTAGCTTAAACTCACAAGAAAAGAAAGAACTGACGCACAAGTTAGAAT CTATTTTCAATAATACCCAA
Downstream 100 bases:
>100_bases CTCAACCATAAAAAATGCCATCCCGGAGGCTGTAATGCCAGTCAGTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGG GTATTTCCAGGGCCTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQ QKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLL DLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
Sequences:
>Translated_234_residues MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQ QKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLL DLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW >Mature_234_residues MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQ QKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLL DLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=206, Percent_Identity=97.5728155339806, Blast_Score=373, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 25708; Mature: 25708
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEK CEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHH VTDALAGDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEK CEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHH VTDALAGDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC YFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]