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The map label for this gene is ygcQ [H]

Identifier: 82545071

GI number: 82545071

Start: 2656685

End: 2657578

Strand: Reverse

Name: ygcQ [H]

Synonym: SBO_2653

Alternate gene names: 82545071

Gene position: 2657578-2656685 (Counterclockwise)

Preceding gene: 82545072

Following gene: 82545066

Centisome position: 58.8

GC content: 55.03

Gene sequence:

>894_bases
ATGGCAGGACTATTTACGCCAAAGGATGCAGCCATGAATATCGCAATTGTGACAATAAATCAGGAGAATGCCGCAATAGC
AAGCTGGCTGGCGGCGCAGGATTTCAGTGGTTGTACCCTGGCGCACTGGCAGATTGAACCTCAGCCTGTAGTGGCGGAAC
AGGTGCTGGATGCGTTGGTGGAACAGTGGCAGCGAACGCCTGCGGACGTTGTTCTCTTTCCGCCGGGAACGTTTGGCGAT
GAACTGTCGACCCGGCTGGCCTGGCGTTTACATGGTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAG
CGTGCGCAAATCCCACTGGGGAAATGCGCTAACGGCGACGCTGCAAACAGAAAAACGCCCGCTATGCCTTTCTCTGGCGC
GTCAGGCGGGAGCAGCGAAAAACGCCACGTTGCCCTCTGGAATACAACAACTGAACATTGTCCCGGGTGCGCTTCCCGAC
TGGCTGGTTAGCACAGAGGATCTGAAAAATGTTACTCGCGACCCATTAGCTGAGGCCAGACGGGTGCTGGTGGTGGGGCA
GGGCGGAGAGGCAGATAACCAGGAAATCGCTATGCTGGCAGAAAAGCTGGGAGCCGAAGTGGGCTACAGTCGGGCGCGAG
TGATGAACGGTGGCGTTGATGCTGAAAAAGTGATTGGTATTTCCGGACATTTGCTGGCACCTGAGGTGTGTATTGTTGTT
GGCGCTTCCGGCGCAGCAGCGTTAATGGCGGGCGTACGCAATAGCAAGTTTGTGGTGGCGATTAATCATGACGCCAGCGC
TGCGGTATTTTCACAGGCAGATGTTGGCGTGGTTGATGACTGGAAAGTGGTGCTGGAGGCACTGGTGACAAACATTCACG
CAGATTGCCAATAA

Upstream 100 bases:

>100_bases
AAATGCCAGCGATGCAGTGTCTGCAACTGGCAAGAGCAGAGCAACGACGCGGAGCGACGCTGATTGATGGGCAAACGGTA
GCAGAAAAAGCTCAAAAGCT

Downstream 100 bases:

>100_bases
TGTGTTGCCGGATGATCCTGCCTACGGTTCTGGCCTGGGGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGG
CGCTGAATGTCGGATGTGGC

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGD
ELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPD
WLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVV
GASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ

Sequences:

>Translated_297_residues
MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGD
ELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPD
WLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVV
GASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>Mature_296_residues
AGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDE
LSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDW
LVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVG
ASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=214, Percent_Identity=34.5794392523364, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI4503607, Length=214, Percent_Identity=34.5794392523364, Blast_Score=91, Evalue=9e-19,
Organism=Escherichia coli, GI87082157, Length=286, Percent_Identity=99.6503496503496, Blast_Score=576, Evalue=1e-166,
Organism=Escherichia coli, GI1787990, Length=246, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786226, Length=116, Percent_Identity=38.7931034482759, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=218, Percent_Identity=33.9449541284404, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325261, Length=217, Percent_Identity=29.9539170506912, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17136898, Length=220, Percent_Identity=32.2727272727273, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24652801, Length=220, Percent_Identity=32.2727272727273, Blast_Score=84, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 31393; Mature: 31262

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALV
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
EQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTAT
HHHCCCCCCEEEECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEE
LQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNVTRDPLAEAR
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCHHHCCCHHHHHHHCCHHHHCC
RVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVV
EEEEEECCCCCCCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEE
GASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
ECCCHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALV
CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
EQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTAT
HHHCCCCCCEEEECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEE
LQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNVTRDPLAEAR
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCHHHCCCHHHHHHHCCHHHHCC
RVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVV
EEEEEECCCCCCCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEE
GASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
ECCCHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]