Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yfiQ [H]

Identifier: 82545039

GI number: 82545039

Start: 2619635

End: 2622295

Strand: Direct

Name: yfiQ [H]

Synonym: SBO_2616

Alternate gene names: 82545039

Gene position: 2619635-2622295 (Clockwise)

Preceding gene: 82545038

Following gene: 82545040

Centisome position: 57.96

GC content: 54.34

Gene sequence:

>2661_bases
ATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGTCGATGAAACCCAATCGCGC
AGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGG
TGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCTTGCCCTTTACACCCGACCTTGCGGTTTTATGTACCAATGCCAGC
CGTAATCTTGCTCTTCTGGAAGAGCTCGGCGAGAAAGGCTGTAAAACCTGCATTATTCTTTCCGCCCCGGCATCGCAACA
CGAAGATCTCCGCGCCTGCGCCCTGCGCCATAACATGCGCCTGCTTGGACCAAACAGTCTGGGTTTACTGGCTCCCTGGC
AAGGTCTGAATGCCAGCTTTTCGCCTGTGCCGATTAAACGCGGCAAGCTGGCGTTTATTTCGCAATCGGCTGCCGTCTCC
AACACCATCCTCGACTGGGCGCAACAGCGTAAGATGGGCTTTTCCTACTTTATTGCGCTCGGCGACAGCCTGGATATCGA
CGTTGATGAATTGCTTGACTATCTGGCACGCGACAGTAAAACCAGCGCCATCCTGCTCTATCTCGAACAGTTAAGCGACG
CGCGACGCTTTGTTTCGGCGGCCCGTAGTGCCTCGCGTAATAAACCGATTCTGGTGATTAAAAGCGGACGTAGCCCGGCG
GCACAGCGACTGCTCAACACCACGGCAGGAATGGACCCGGCATGGGATGCGGCTATTCAGCGTGCCGGTTTGTTGCGGGT
ACAGGACACCCACGAGCTGTTTTCGGCGGTGGAAACCCTTAGCCATATGCGCCCGCTACGTGGCGACCGGCTGATGATTA
TCAGCAACGGTGCTGCGCCTGCCGCGCTGGCGCTGGATGCCTTATGGTCACGCAATGGCAAGCTGGCAACGCTAAGCGAA
GAAACCTGCCAGAAACTGCGCGATGCACTGCCAGAACATGTGGCAATATCTAACCCGCTCGATCTACGCGATGACGCCAG
CAGTGAGCACTATATTAAAACGCTGGATATTCTGCTCCACAGCCAGGATTTTGACGCGCTGATGGTTATTCATTCGCCCA
GCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCT
TTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCG
TACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGG
CGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGTCG
CTCGATACCCATGAAGTTCAGCCCATCCTGCAAGCGTATGGCATGAACACGCTCCCTACCTGGATTGCCAGCGATAGCAC
CGAAGCGGTGCATATTGCCGAACAGATTGGTTATCCGGTGGCGCTGAAATTGCGTTCGCCGGATATTCCACATAAATCGG
AAGTTCAGGGCGTCATGCTGTACTTGCGTACAGCCAATGAAGTCCAGCAAGCGGCAAACGCCATTTTCGATCGCGTAAAA
ATGGCCTGGCCGCAGGCGCGGATCCACGGCCTGTTGGTGCAAAGTATGGCTAACCGTGCTGGCGCTCAGGAGTTGCGGGT
TGTGGTTGGGCACGATCCGGTTTTCGGGCCGTTGATCATGCTGGGTGAAGGCGGTGTGGAGTGGCGTCCTGAAGATCAAG
CCGTCGTCGCACTGCCGCCGCTGAACATGAACCTGGCCCGCTATCTGGTTATTCAGGGGATCAAAAGTAAAAAGATTCGT
GCGCGCAGTGCGCTACGCCCATTGGATGTTGCAGGCTTGAGCCAGCTTCTGGTGCAGGTTTCCAACTTGATTGTCGATTG
CCCGGAAATTCAGCGTCTGGATATTCATCCTTTGCTGGCTTCTGGCAGTGAATTTACCGCGCTGGATGTCACGCTGGATA
TCTCGCCGTTTGAAGGCGATAACGAGAGTCGGCTGGCAGTGCGCCCTTATCCGCATCAGCTGGAAGAATGGGTAGAATTG
AAAAACGGTGAACGCTGCTTGTTCCGCCCGATTTTGCCAGAAGATGAGCCACAACTTCAGCAATTCATTTCGCGAGTCAC
CAAAGAAGATCTTTATTACCGCTACTTTAGCGAGATCAACGAATTTACCCATGAAGATTTAGCCAACATGACACAGATCG
ACTACGATCGGGAAATGGCGTTTGTAGCGGTACGACGTATTGATCAAACGGAAGAGATCCTCGGCGTCACGCGTGCGATT
TCCGATCCTGATAACATCGATGCCGAATTTGCTGTGCTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTT
AATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGTGGCA
TGGTGGCGCTAGCCCGCAAGCTCGGGTTTAACGTTGATATCCAGCTCGAAGAGGGGATCGTTGGGCTTACGCTAAATCTT
GCCCAACGCGAGGAATCATGA

Upstream 100 bases:

>100_bases
ACACGCTATCTGGCAGGGAAAACGCAACATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGT
CACTTCTGCGGGAGACCGGT

Downstream 100 bases:

>100_bases
GTAAGGTACTGGAAATGTTGACTACTTAATCGGGACTGGTGTTATTATTGCCCGCTTATGTCGTCTGCATTGCACAGAGG
ATCCTTCAATGAACAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 886; Mature: 885

Protein sequence:

>886_residues
MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNAS
RNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA
AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSE
ETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVS
LLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS
LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVK
MAWPQARIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIR
ARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVEL
KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAI
SDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNL
AQREES

Sequences:

>Translated_886_residues
MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNAS
RNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA
AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSE
ETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVS
LLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS
LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVK
MAWPQARIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIR
ARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVEL
KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAI
SDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNL
AQREES
>Mature_885_residues
SQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASR
NLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSN
TILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPAA
QRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEE
TCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSL
LTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATSL
DTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKM
AWPQARIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRA
RSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELK
NGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAIS
DPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLA
QREES

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=886, Percent_Identity=99.7742663656885, Blast_Score=1810, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 97931; Mature: 97800

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW
CCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCE
LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIAL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE
GDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA
CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAP
HHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
AALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLH
HHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHC
SQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML
CCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHH
YLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIM
EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE
LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV
ECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
SNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVEL
HHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHH
KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL
HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES
HHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEHHCCCCC
>Mature Secondary Structure 
SQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW
CCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCE
LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIAL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE
GDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA
CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAP
HHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
AALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLH
HHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHC
SQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML
CCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHH
YLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIM
EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE
LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV
ECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
SNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVEL
HHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHH
KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL
HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES
HHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]