Click here to switch to the map view.

The map label for this gene is hcaC [H]

Identifier: 82544989

GI number: 82544989

Start: 2566116

End: 2566436

Strand: Direct

Name: hcaC [H]

Synonym: SBO_2564

Alternate gene names: 82544989

Gene position: 2566116-2566436 (Clockwise)

Preceding gene: 82544988

Following gene: 82544990

Centisome position: 56.77

GC content: 55.45

Gene sequence:

>321_bases
ATGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGC
CCTGTTCAACGTTGGCGGCGAGTTTTATGCCATTAACGATCGTTGCAGCCATGGTAATGCGTCGATGTCAGAAGGGTATC
TGGAAGATGACGCCACGGTGGAGTGCCCGCTACACGCCGCCAGTTTTTGCCTGAAAACGGGGAAAGCGTTATGCCTGCCC
GCCACCGATCCGCTCACCACTTATCCAGTACACGTTGAAGGTAGTGACATTTTCATCGACTTACCGGAGGCGCAGCCATG
A

Upstream 100 bases:

>100_bases
AAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAAGCGGTAATCACTTCCCAT
AACCTGAGTGTACTGTTCTG

Downstream 100 bases:

>100_bases
GCGATCTGCATAACGAGTCCATTTTTATTACCGGCGGCGGATCGGGATTAGGGCTGGCGCTGGTCGAGCGATTTATCGAA
GAAGGCGCGCAGGTTGCCAC

Product: 3-phenylpropionate dioxygenase ferredoxin subunit

Products: NA

Alternate protein names: Digoxigenin ferredoxin subunit [H]

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLP
ATDPLTTYPVHVEGSDIFIDLPEAQP

Sequences:

>Translated_106_residues
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLP
ATDPLTTYPVHVEGSDIFIDLPEAQP
>Mature_106_residues
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLP
ATDPLTTYPVHVEGSDIFIDLPEAQP

Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP- dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively. This protein se

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=106, Percent_Identity=99.0566037735849, Blast_Score=217, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11359; Mature: 11359

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATV
CCEEEECCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCEE
ECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLPEAQP
EECCHHHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCC
>Mature Secondary Structure
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATV
CCEEEECCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCEE
ECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLPEAQP
EECCHHHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA