Click here to switch to the map view.

The map label for this gene is yfgH [H]

Identifier: 82544954

GI number: 82544954

Start: 2525786

End: 2526031

Strand: Direct

Name: yfgH [H]

Synonym: SBO_2529

Alternate gene names: 82544954

Gene position: 2525786-2526031 (Clockwise)

Preceding gene: 82544950

Following gene: 82544955

Centisome position: 55.88

GC content: 45.53

Gene sequence:

>246_bases
ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC
ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCAGT
TTACGACAGGTTTAGCCGTTGTTATTACCACAACGTATAACGAAACGCGTATTCAGCCAAATACTAAATGTCCTGAAAAG
AGCTAA

Upstream 100 bases:

>100_bases
CGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGT
AGTTGCCATGTTTTACGGCA

Downstream 100 bases:

>100_bases
TAATCAGGAGGAGTCATGAAGAAAGTTTTTCTTTGCGCCATCTTGGCCTCCTTAAGCTATCCGGCTATCGCCTCATCATT
GCAGGATCAACTCTCTGCTG

Product: IS1 encoded protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQFTTGLAVVITTTYNETRIQPNTKCPEK
S

Sequences:

>Translated_81_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQFTTGLAVVITTTYNETRIQPNTKCPEK
S
>Mature_81_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQFTTGLAVVITTTYNETRIQPNTKCPEK
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788852, Length=39, Percent_Identity=79.4871794871795, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 8695; Mature: 8695

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQFTTGLAV
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEE
VITTTYNETRIQPNTKCPEKS
EEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQFTTGLAV
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEE
VITTTYNETRIQPNTKCPEKS
EEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]