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The map label for this gene is nlpB [H]

Identifier: 82544925

GI number: 82544925

Start: 2487875

End: 2488912

Strand: Reverse

Name: nlpB [H]

Synonym: SBO_2494

Alternate gene names: 82544925

Gene position: 2488912-2487875 (Counterclockwise)

Preceding gene: 82544926

Following gene: 82544924

Centisome position: 55.07

GC content: 55.11

Gene sequence:

>1038_bases
TTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTATTTTATTACTCGCTGCCTGTAG
TTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCCTACCTGGAAGCGGCACCGCTTGCGGAGCTTCATGCCC
CGGCTGGAATGATTTTGCCGGTGACCTCCGGTGATTATGCAATCCCGGTGACCAACGGTAGTGGTGCTGTCGGTAAGGCG
CTGGACATTCGTCCACCAGCCCAGCCGCTGGCACTGGTTTCTGGCGTGCGTACCCAGTTCACGGGCGATACCGCTTCATT
GCTGGTGGAAAATGGTCGTGGCAATACTCTGTGGCCGCAGGTGGTTAGCGTGCTGCAGGCGAAAAACTACACCATCACCC
AACGTGATGATGCTGGTCAGACACTGACCATCGATTGGGTACAATGGAACCGTCTGGACGAAGACGAGCAGTATCGTGGT
CGTTATCAAATCTCTGTTAAGCCGCAGGGTTATCAGCAGGCGGTTACGGTTAAACTGCTGAACCTGGAACAGGCGGGCAA
ACCGGTTGCAGACGCGGCTTCCATGCAGCGTTACAGCACGGAGATGATGAACGTTATTTCCGCCGGTCTGGATAAATCTG
CCTCTGACGCCGCGAACGCTGCGCAAAATCGTGCCTCCACCACTATGGACGTACAAAGTGCAGCTGATGACACCGGTTTA
CCGATGCTGGTCGTACGCGGGCCGTTCAATGTGGTTTGGCAACGTCTGCCAGCGGCGCTGGAAAAAGTGGGCATGAAAGT
GACCGACAGCACCCGTTCGCAGGGTAACATGGCCGTAACTTATAAGCCGCTGTCTGACAGCGACTGGCAGGAACTGGGCG
CGAGCGATCCAGGCCTGGCATCCGGTGACTATAAACTGCAGGTTGGCGATTTAGATAACCGCAGCAGCCTACAGTTCATC
GATCCGAAAGGTCATACTCTGACTCAGAGTCAGAACGACGCGCTGGTAGCTGTCTTCCAGGCTGCGTTTAGCAAGTAA

Upstream 100 bases:

>100_bases
GATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTT
GCTGTAAAGTTTAGGGAGAT

Downstream 100 bases:

>100_bases
AAATACAGGGCTGGAGTCATCCGGCCCTTTTTTCTGATATGATACGCAAACGTGTGCGTCGGCAGAAAAATGCAATTTTA
GCGGTAATTCGCACGAAATT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MMAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKA
LDIRPPAQPLALVSGVRTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRG
RYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAANAAQNRASTTMDVQSAADDTGL
PMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFI
DPKGHTLTQSQNDALVAVFQAAFSK

Sequences:

>Translated_345_residues
MMAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKA
LDIRPPAQPLALVSGVRTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRG
RYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAANAAQNRASTTMDVQSAADDTGL
PMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFI
DPKGHTLTQSQNDALVAVFQAAFSK
>Mature_345_residues
MMAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKA
LDIRPPAQPLALVSGVRTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRG
RYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAANAAQNRASTTMDVQSAADDTGL
PMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFI
DPKGHTLTQSQNDALVAVFQAAFSK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=344, Percent_Identity=98.8372093023256, Blast_Score=693, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 37014; Mature: 37014

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCHHHHCCCCCEEEE
VTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGDTASLLVENGRGNTLWPQ
ECCCCEEEEEECCCCCCCCEEECCCCCCHHHHHHCCHHCCCCCCEEEEEECCCCCCHHHH
VVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLL
HHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCHHHCCEEEEEECCCCCCEEEEEEEE
NLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAANAAQNRASTTMDVQSAADDTGL
EHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCC
PMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLA
EEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCC
SGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK
CCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MMAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCHHHHCCCCCEEEE
VTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGDTASLLVENGRGNTLWPQ
ECCCCEEEEEECCCCCCCCEEECCCCCCHHHHHHCCHHCCCCCCEEEEEECCCCCCHHHH
VVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLL
HHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCHHHCCEEEEEECCCCCCEEEEEEEE
NLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAANAAQNRASTTMDVQSAADDTGL
EHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCC
PMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLA
EEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCC
SGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK
CCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]