| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ypfG [H]
Identifier: 82544914
GI number: 82544914
Start: 2471784
End: 2472827
Strand: Reverse
Name: ypfG [H]
Synonym: SBO_2482
Alternate gene names: 82544914
Gene position: 2472827-2471784 (Counterclockwise)
Preceding gene: 82544915
Following gene: 82544913
Centisome position: 54.71
GC content: 55.27
Gene sequence:
>1044_bases ATGCGCTATCGCATTTTCCTTCTCTTTTTTTTCGCTTTGTTGCCGACGTCTTTGGTGTGGGCGGCACCAGCGCAACGGGC GTTTTCCGACTGGCAGGTCACCTGTAATAACCAAAACTTCTGCGTGGCGCGTAATACGGGCGATCATAATGGACTGGTGA TGACCCTGAGCCGCAGCGCCGGGGCGCATACCGATGCCGTTTTACGTATTGAGCGCGGCGGATTGAAGTCGCCGGAGGCG TCAGAAGGGGAGATAGCGCCACGGCTGCTGTTAGATGGCGAGCCGTTGGCGTTAAGTGGTGACAAGTGGCGGATTTCACC ATGGTTATTAGTAACCGATGATACGGCAACCATCACCGCGTTTTTGCAGATGATTCAGGAAGGGAAGGCGATCACCTTAC GCGACGGCAATCAGACCATTTCGCTGAGTGGCTTAAAAGCGGCGTTGTTGTTTATTGATGCTCAGCAAAAGCGCGTTGGC AGTGAAACCGCGTGGATCAAGAAAGGGGACGAACCGCCGCTCAGCGTACCGCCCGCGCCTGCGCTGAAAGAGGTCGCGGT GGTTAACCCAACGCCGACGCCACTCTCACTCGAAGAACGCAACGATTTGCTGGATTATGGAAACTGGCGGATGAATGGTC TGCGCTGCTCGCTTGATCCATTGCGTCGTGAGGTGAATGTCACTGCGCTGACTGATGATAAAGCGCTGATGATGATTAGC TGTGAGGCAGGGGCCTATAACACCATTGATTTGGCATGGATTGTGTCGCGTAAAAATCCGCTGGCCTCGCGCCCGGTTCG GTTGCGTTTGCCGTTCAACAACGGGCAGGAGACGAATGAACTGGAACTGATGAACGCAACATTTGATGAGAAATCGCGTG AACTGGTGACCTTAGCGAAAGGGCGCGGATTAAGCGATTGTGGCATTCAGGCGCGCTGGCGCTTTGACGGTCAGCGTTTT CGCCTGGTGCGTTACGCCGCAGAACCCACCTGCGATAACTGGCATGGGCCAGACGCCTGGCCCACGTTGTGGATCACCCG TTAA
Upstream 100 bases:
>100_bases TATTATTGGCTCAATCCGACAAATCCGATTGAGCCGCGCTACCTGCGCAACGAAGATACGACTTGTGCTGTTTGTTTGAA CTTCTGGGGTCGTACCGTCC
Downstream 100 bases:
>100_bases ACAAAATGGCGGGGACATGTAGGCCGGATAAGACGCTGTAGGCCGGATAAGACGCGTCAGAGTCGCATCCGGCAATCAGC GTCCGGCAATCAGCATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR
Sequences:
>Translated_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR >Mature_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=99.4236311239193, Blast_Score=705, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009560 [H]
Pfam domain/function: PF06674 DUF1176 [H]
EC number: NA
Molecular weight: Translated: 38732; Mature: 38732
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCCHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCCHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]