| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is eutJ [H]
Identifier: 82544903
GI number: 82544903
Start: 2458020
End: 2458856
Strand: Reverse
Name: eutJ [H]
Synonym: SBO_2469
Alternate gene names: 82544903
Gene position: 2458856-2458020 (Counterclockwise)
Preceding gene: 82544904
Following gene: 82544902
Centisome position: 54.4
GC content: 58.9
Gene sequence:
>837_bases ATGGCGCACGACGAACAATGGCTCACCCCACGTCTGCAAACGGCGGCAACGCTGTGTAACCAGACGCCCGCCGCGACGGA ATCTCCGCTGTGGCTGGGGGTGGATCTGGGCACCTGCGATGTGGTGTCGATGGTTGTCGACCGCGACGGTCAGCCGGTGG CGGTATGCCTCGACTGGGCCGATGTGGTCCGCGACGGCATCGTCTGGGATTTCTTCGGCGCTGTCACCATTGTTCGTCGC CATCTCGACACGCTCGAGCAGCAATTCGGTCGCCGTTTTAGCCATGCGGCGACTTCATTTCCTCCAGGTACGGACCCGCG TATTTCCATCAACGTGCTGGAGTCTGCTGGACTGGAAGTGAGCCATGTGCTGGATGAGCCAACCGCAGTTGCGGAGCTGC TGCAACTGGACAACGCCGGTGTAGTGGATATCGGCGGCGGCACTACCGGCATTGCCATCGTGAAAAAGGGCAAGGTGACG TACTCGGCGGATGAAGCAACCGGCGGACATCACATCTCTCTGACTCTCGCCGGAAATCGCCGTATTTCGCTGGAAGAGGC GGAGCAGTACAAGCGCGGTCACGGTGAAGAGATTTGGCCTACGGTGAAACCGGTGTACGAAAAAATGGCGGACATTGTCG CCCGGCATATTGAAGGGCAGGGCATTACTGATTTATGGCTGGCGGGCGGCTCTTGTATGCAACCGGGCGTGGCGGAACTG TTTCGCAAACAATTCCCGGCGTTACAGGTGCATTTACCGCAGCACAGTTTGTTTATGACCCCGCTGGCGATCGCCAGTAG TGGGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGA
Upstream 100 bases:
>100_bases ACCACGCCAACCGGTGAAGGGGTAACCAGCGCGCGTACGTTTGTCCGTCTGCGTCGCTGTGTATTAGTCGATGCGTTTCG CATTGTTTAAGGAGTAACAG
Downstream 100 bases:
>100_bases ATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAATCTGCAACGGGTAAAAACATTTAGCGTTCCACCGGTGACGC TTTGCGGTCCGGGCTCGGTG
Product: ethanolamine utilization
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRR HLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK
Sequences:
>Translated_278_residues MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRR HLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK >Mature_277_residues AHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRH LDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVTY SADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAELF RKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK
Specific function: Ethanolamine utilization. [C]
COG id: COG4820
COG function: function code E; Ethanolamine utilization protein, possible chaperonin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788796, Length=278, Percent_Identity=99.2805755395683, Blast_Score=568, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003494 - InterPro: IPR013366 [H]
Pfam domain/function: PF02491 FtsA [H]
EC number: NA
Molecular weight: Translated: 30127; Mature: 29995
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEECHH DVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCH SHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNR HHHHCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCC RISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCHHHH FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK HHHHCCEEEEECCCCHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure AHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWA CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEECHH DVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCH SHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNR HHHHCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCC RISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCHHHH FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK HHHHCCEEEEECCCCHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]