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The map label for this gene is yccZ [H]

Identifier: 82544693

GI number: 82544693

Start: 2234512

End: 2235651

Strand: Direct

Name: yccZ [H]

Synonym: SBO_2247

Alternate gene names: 82544693

Gene position: 2234512-2235651 (Clockwise)

Preceding gene: 82544692

Following gene: 161984908

Centisome position: 49.44

GC content: 50.96

Gene sequence:

>1140_bases
ATGAAAAAGAACATTTTTAAGTTTTCGGTACTGACATTGGCTGTTCTGTCTTTGACAGCATGTACCCTTGTTCCTGGTCA
GAATTTATCGACCAGGAACAAGGATGTCATTGAACTACCTGACAATCAGTATGACCTGGACAAAATGGTCAATATCTATC
CCGTCACGCCAGGATTGATTGATCAGTTGCGCGCCAAACCGATTATGTCGCAGGCTAACCCGGAGCTGGAGCAGCAAATC
GCAAACTATGAATATCGTATCGGGATTGGTGATGTGTTGATGGTTACGGTCTGGGATCACCCGGAACTAACCACCCCCGC
AGGGCAATACCGTAGCGCCAGTGATACCGGCAACTGGGTTAACGCCGATGGTGCGATTTTCTACCCCTATATTGGTCGCC
TGAAAGTGGCCGGGAAAACACTTACCCAAGTACGCAACGAGATTACAGCGCGTCTCGATTCAGTCATTGAAAGCCCGCAA
GTCGATGTCAGCGTCGCGGCGTTCCGATCGCAAAAAGCGTACGTCACCGGCGAAGTCAGCAAATCGGGTCAGCAGCCGAT
TACCAATATTCCTCTGACCATCATGGATGCGATTAACGCCGCGGGCGGTCTGACCGCAGATGCAGACTGGCGCAACGTGG
TGCTCACCCAGAATGGCGTAAAGACCAAAGTGAACCTCTATGCGCTGATGCAGCGTGGCGACTTGCGCCAGAACAAACTG
CTGCACCCGGGCGATATTTTATTTATTCCGCGCAACGATGATCTGAAAGTCTTCGTGATGGGTGAAGTGGGTAAACAGAG
CACGCTGAAAATGGACCGCAGCGGTATGACCCTGGCGGAAGCGCTGGGTAACGCTGAGGGTATGAATCAGGATGTCGCTG
ATGCGACGGGGATTTTTGTTATTCGTGCAACGCAAAACAAGCAGAATGGCAAAATCGCCAATATTTATCAGCTGAATGCG
AAGGACGCATCGGCAATGATACTCGGAACGGAATTCCAGCTTGAACCTTACGACATTGTTTATGTCACTACCGCGCCGCT
GGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACCTGACAGAGACTTCACGGTGGA
TTCAAACATGGCCCAACTAA

Upstream 100 bases:

>100_bases
CAAATACCAGCTCTATCCAATGACGGCAGAGCGAGAAGTACCGGTTGGACAATAACCTGACGTAATTCATAACATTACAT
TGACTGATAAATATAAACCA

Downstream 100 bases:

>100_bases
AATTTAACTCCATCCTGGTGGTTTGTACCGGCAACATTTGCCGTTCGCCCATTGGCGAGCGCTTGCTGCGTAAACGTCTG
CCAGGCGTAAAAGTCAAATC

Product: function in exopolysaccharide production

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQI
ANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNA
KDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN

Sequences:

>Translated_379_residues
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQI
ANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNA
KDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN
>Mature_379_residues
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQI
ANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNA
KDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=379, Percent_Identity=99.7361477572559, Blast_Score=775, Evalue=0.0,
Organism=Escherichia coli, GI1788376, Length=379, Percent_Identity=64.1160949868074, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 41810; Mature: 41810

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQYDLDKMVNIYPVTPGLI
CCCCEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCHHH
DQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWV
HHHHCCCCHHHCCHHHHHHHHCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE
NADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVS
CCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECC
KSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCC
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFV
CCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEE
IRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPT
EEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHH
ISGVHDLTETSRWIQTWPN
HCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQYDLDKMVNIYPVTPGLI
CCCCEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCHHH
DQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWV
HHHHCCCCHHHCCHHHHHHHHCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE
NADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVS
CCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECC
KSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCC
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFV
CCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEE
IRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPT
EEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHH
ISGVHDLTETSRWIQTWPN
HCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]