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The map label for this gene is ymcD [H]

Identifier: 82544689

GI number: 82544689

Start: 2230553

End: 2230876

Strand: Direct

Name: ymcD [H]

Synonym: SBO_2243

Alternate gene names: 82544689

Gene position: 2230553-2230876 (Clockwise)

Preceding gene: 82544688

Following gene: 82544690

Centisome position: 49.35

GC content: 55.56

Gene sequence:

>324_bases
ATGAATAAAGGAAAAGTTATGAAACACAAGCTTTCTGCAATCCTTATGGCCTTCATGTTGACGACGCCAGCTGCGTTTGC
TGCCCCTGAAGCAACAAACGGGACCGAGGCAACGACGGGTACTACTGGCACCACAACGACCACTACCGGCGCAACCACGA
CTGCTACTACCACTGGTGGCGTGGCTGCTGGCGCTGTCGGCACGGCGACAGTTGTCGGTGTGGCAACGGCTGTTGGTGTG
GCGACGTTGGCAGTTGTTGCAGCAAATGACAGTGGCGATGGCGGTTCTCATAACACCTCAACCACCACGTCCACTACACG
CTAA

Upstream 100 bases:

>100_bases
GCAGTATATAGTGCTAGCGGTATGAGGAAAGGGAGATTTCACAAGGATGTTATACTCAAAGTAGACAATCCTGATCTCAA
GCGTACGTATTGTCCATGCG

Downstream 100 bases:

>100_bases
TACTGCTTTAACGCGTCGAAATTAAAGTTAAATGATACCCGGTTGCGATATTCGTACCGGGCTTTAAAGATTTGCATTTT
TTTAATTAACCTTTCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Group 4 capsule protein A homolog [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNKGKVMKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGV
ATLAVVAANDSGDGGSHNTSTTTSTTR

Sequences:

>Translated_107_residues
MNKGKVMKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGV
ATLAVVAANDSGDGGSHNTSTTTSTTR
>Mature_107_residues
MNKGKVMKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGV
ATLAVVAANDSGDGGSHNTSTTTSTTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein. Note=When the protein is overexpressed [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081813, Length=101, Percent_Identity=100, Blast_Score=177, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10165; Mature: 10165

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGKVMKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCC
VAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKGKVMKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCC
VAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]