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The map label for this gene is torT [H]

Identifier: 82544683

GI number: 82544683

Start: 2223843

End: 2224832

Strand: Reverse

Name: torT [H]

Synonym: SBO_2237

Alternate gene names: 82544683

Gene position: 2224832-2223843 (Counterclockwise)

Preceding gene: 82544686

Following gene: 82544681

Centisome position: 49.22

GC content: 52.63

Gene sequence:

>990_bases
ATGCGCGTACTGCTATTTTTACTTCTTTCCCTTTTCATGTTATCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGA
TGCGCAGCATTACACGGTGCAAGCCTCTACGCCGCTTAAAGCCAAACGCGCATGGAAACTGTGCGCGCTTTATCCCAGCC
TGAAAGATTCATACTGGTTATCGTTGAACTATGGTATGCAGGAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCA
CAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATTTTGCTCGGTAGTAGCACTACGTCATTTCCCGACCTGCAAAA
GCAGGTAGCAAATCTGCCGGTGATCGAACTGGTAAATGCTCTTGATGATCCCCTGGTGAAAAGCCGCGTTGGTGTACCCT
GGTTTCAGATGGGCTATCAACCTGGGCGATATTTGGTGCAATGGGCGCACGGTAAACCACTGAACGTGCTGTTGATGCCC
GGACCCGATAATGCCGGGGGCAGTAAAGAGATGGTCGAGGGTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGT
TGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCACCCAGAAATCG
ACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGTGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTG
TCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGATCTG
GCAGGGGGAACTGGCGGTTGAGCAGGCCATCAGGCAATTACAGGGGCAATCGGTGTCTGATAATGTCAGCCCACCGATTT
TAGTTCTGACGCCGAAAAATGCCGACCGTGAACATATTCGCCGCTCGCTGTCACCAGGGGGATTTCGTCCGGTCTATTTT
TATCAGCACACATCAGCGGCTAAGAAATAA

Upstream 100 bases:

>100_bases
GGTCAGGGTTAAATTCACGGTCGGTGCACTTTAGGTGAAAAAGGTTGAGTCGCAAAGCAGAATGCATCTAGCATAAAGCC
TTATTATTGATTAGGCTATC

Downstream 100 bases:

>100_bases
CATTCACCATGTTGCGTCACCAGTAAATCCGCGCTGAGTTTATGACGTAAACGACGAATTAACACATCGACGGTGCGCAG
GTCAGGGTTTTCCACCCGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQA
QIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVV
SFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYF
YQHTSAAKK

Sequences:

>Translated_329_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQA
QIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVV
SFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYF
YQHTSAAKK
>Mature_329_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQA
QIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVV
SFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYF
YQHTSAAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=342, Percent_Identity=94.1520467836257, Blast_Score=610, Evalue=1e-176,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36469; Mature: 36469

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNA
EEECCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHH
LDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIA
HCCHHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCHHHHH
SFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKN
HHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
ADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCHHHHHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNA
EEECCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHH
LDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIA
HCCHHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCHHHHH
SFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKN
HHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
ADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCHHHHHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]