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The map label for this gene is ycaO [H]

Identifier: 82544643

GI number: 82544643

Start: 2169380

End: 2171149

Strand: Reverse

Name: ycaO [H]

Synonym: SBO_2191

Alternate gene names: 82544643

Gene position: 2171149-2169380 (Counterclockwise)

Preceding gene: 82544647

Following gene: 82544642

Centisome position: 48.04

GC content: 51.02

Gene sequence:

>1770_bases
GTGATTTTCATGACGCAAACATTTATCCCCGGCAAAGATGCCGCTCTGGAAGATTCCATCGCTCGCTTCCAGCAAAAACT
TTCAGACCTCGGCTTTCAGATTGAAGAGGCCTCCTGGCTGAATCCTGTGCCTAACGTCTGGTCTGTACATATTCGCGACA
AAGAGTGCGCACTGTGTTTTACCAACGGTAAAGGCGCAACCAAAAAAGCGGCGCTGGCTTCTGCACTTGGTGAATATTTC
GAGCGTCTCTCAACCAACTACTTTTTTGCTGATTTCTGGCTGGGCGAAACCATCGCCAACGGTCCGTTCGTGCATTATCC
CAACGAAAAATGGTTCCCACTGACCGAAAATGACGATGTGCCAGAAGGACTACTCGATGACCGTCTGCGCGCGTTTTATG
ATCCGGAGAATGAACTGACCGGCAGCATGCTGATTGACCTACAATCCGGTAACGAAGATCGTGGTATTTGCGGCCTGCCG
TTTACGCGTCAGTCCGACAATCAGACCGTTTATATTCCGATGAATATCATTGGTAACCTGTACGTCTCCAACGGTATGTC
CGCAGGTAATACCCGCAACGAAGCACGCGTTCAGGGATTGTCTGAAGTTTTCGAACGCTACGTGAAAAACCGCATTATTG
CTGAAAGCATCAGCCTGCCAGAGATCCCGGCAGACGTGCTGGCGCGTTACCCAGCGGTGGTTGAAGCGATCGAAACACTG
GAAGCAGAAGGTTTCCCGATCTTCGCATATGATGGTTCCCTTGGCGGCCAGTATCCGGTGATTTGCGTGGTACTGTTCAA
TCCTGCTAACGGTACCTGCTTTGCCTCTTTCGGTGCGCATCCTGATTTTGGCGTAGCACTGGAACGTACCGTGACCGAGC
TGCTGCAAGGTCGTGGCCTGAAAGATTTGGATGTGTTTACTCCGCCAACCTTCGATGATGAAGAAGTCGCTGAACATACC
AACCTCGAAACGCACTTTATCGATTCCAGCGGTTTAATCTCCTGGGACCTGTTCAAGCAGGATGCCGATTATCCGTTTGT
GGACTGGAATTTCTCCGGCACCACGGAAGAAGAGTTTGCTACGCTGATGGCTATCTTCAACAAAGAAGATAAAGAAGTTT
ATATTGCCGATTACGAGCATCTGGGCGTTTATGCTTGCCGTATTATCGTGCCTGGCATGTCCGATATTTATCCGGCTGAA
GATCTGTGGCTCGCGAATAACAGTATGGGCAGCCATTTACGTGAAACGATTCTTTCGCTACCAGGCAGCGAGTGGGAAAA
AGAAGATTACCTGAACCTCATCGAGCAACTGGATGAAGAAGGTTTTGATGACTTTACCCGCGTGCGTGAGCTGTTGGGTC
TGGCGACCGGGTCGGATAACGGTTGGTACACCCTGCGTATCGGTGAATTAAAAGCCATGCTGGCGCTGGCTGGTGGCGAT
CTGGAACAGGCTCTGGTCTGGACCGAATGGACGATGGAGTTTAACTCATCAGTATTTAGTCCGGAACGCGCCAACTATTA
TCGCTGCCTGCAAACGTTGTTATTACTGGCACAGGAAGAAGATCGCCAGCCGCTGCAATATCTGAATGCGTTTGTTCGCA
TGTACGGCGCAGATGCCGTGGAAGCCGCCAGTGCGGCAATGAGCGGCGAAGCGGCGTTTTACGGCCTGCAACCGGTAGAT
AGCGATCTGCACGCGTTTGCTGCACATCAGTCGTTGTTGAAGGCCTACGAAAAGCTGCAGCGCGCCAAAGCAGCATTCTG
GGCAAAATAA

Upstream 100 bases:

>100_bases
TATTCGCTAAAAGCATAGTCAACAGTTCATCGGCATGGCGGCGGTGATAGCGCCTTTGAGCATAAAACCCGTATTATTGC
GCGCTTTCCGTACGACTAAA

Downstream 100 bases:

>100_bases
AATCAAATAGCCTACGCAATGTAGGCTTAATGATTAGTCTGAGTTATATTACGGGGCGTTTTTTTAATGCCCCGCTTTAC
ATATATTTGCATTAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVD
SDLHAFAAHQSLLKAYEKLQRAKAAFWAK

Sequences:

>Translated_589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVD
SDLHAFAAHQSLLKAYEKLQRAKAAFWAK
>Mature_589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVD
SDLHAFAAHQSLLKAYEKLQRAKAAFWAK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=100, Blast_Score=1211, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 66044; Mature: 66044

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEE
TNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDV
ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCEEECCCCCCCCCCCCCCC
PEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNL
CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCC
YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGL
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
KDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFA
CCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHH
TLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSL
HHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHC
PGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCC
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAV
HHHEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH
EAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEE
TNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDV
ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCEEECCCCCCCCCCCCCCC
PEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNL
CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCC
YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETL
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGL
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
KDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFA
CCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHH
TLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSL
HHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHC
PGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGD
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCC
LEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAV
HHHEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH
EAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]