| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is mglC [H]
Identifier: 82544633
GI number: 82544633
Start: 2157694
End: 2158704
Strand: Direct
Name: mglC [H]
Synonym: SBO_2179
Alternate gene names: 82544633
Gene position: 2157694-2158704 (Clockwise)
Preceding gene: 82544632
Following gene: 82544637
Centisome position: 47.74
GC content: 50.25
Gene sequence:
>1011_bases ATGAGTGCGTTAAATAAGAAAAGTTTTCTTACTTACCTGAAAGAGGGCGGTATTTACGTCGTTCTTTTAGTTTTGCTGGC GATTATTATTTTCCAGGACCCAACATTTTTAAGTCTGTTGAACTTAAGTAATATTCTCACCCAGTCATCGGTGCGTATTA TTATCGCGCTCGGTGTGGCAGGGTTAATTGTCACCCAGGGGACCGACCTTTCTGCGGGGCGTCAAGTAGGGCTGGCAGCA GTGGTGGCAGCGACATTATTGCAGTCCATGGATAACGCCAATAAAGTGTTCCCGGAAATGGCGACGATGCCGATTGCGCT GGTTATTCTGATTGTCTGTGCCATTGGTGCGGTGATCGGTTTGATCAACGGTCTGATTATCGCTTATCTCAACGTTACGC CGTTCATTACCACGCTCGGCACGATGATCATCGTCTATGGCATCAACTCGCTCTATTACGACTTTGTCGGGGCGTCGCCA ATTTCTGGTTTTGACAGTGGCTTCTCTACCTTTGCTCAGGGCTTTGTCGCGCTGGGGAGTTTCCGTCTCTCTTACATCAC CTTCTACGCGTTGATTGCGGTGGCGTTCGTCTGGGTGTTGTGGAACAAAACCCGCTTCGGTAAGAACATTTTTGCCATTG GCGGTAACCCGGAAGCGGCAAAAGTATCTGGTGTCAACGTCGGCCTGAACCTGCTGATGATCTACGCGTTGTCTGGCGTG TTCTATGCCTTTGGCGGGATGTTAGAAGCCGGACGTATCGGCTCTGCCACCAACAACCTCGGCTTTATGTATGAGCTGGA TGCTATCGCGGCGTGCGTGGTAGGCGGTGTATCGTTCAGCGGCGGTGTGGGGACGGTGATTGGCGTGGTGACCGGGGTAA TTATTTTTACCGTCATCAACTATGGCCTGACGTATATCGGCGTAAACCCATGCTGGCAGTACATCATCAAAGGGGCGATT ATTATCTTCGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGA
Upstream 100 bases:
>100_bases GAGCAATGGTCTCGTTTCCGGAATTGTCGACACAAAAACAACAACGCAAAACGAAATTCTGCGTCTTGCGTCTTTGCACC TTTAAGATTAGGGGCTTCCC
Downstream 100 bases:
>100_bases TGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTTGTAGGCCGGATAAGGCGTTCA AGCCGCATCCGGCGACAGGA
Product: beta-methylgalactoside transporter inner membrane component
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA VVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAI IIFAVALDSLKYARKK
Sequences:
>Translated_336_residues MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA VVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAI IIFAVALDSLKYARKK >Mature_335_residues SALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAV VAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPI SGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVF YAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAII IFAVALDSLKYARKK
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788471, Length=336, Percent_Identity=99.7023809523809, Blast_Score=646, Evalue=0.0, Organism=Escherichia coli, GI1790191, Length=323, Percent_Identity=34.3653250773994, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1789992, Length=376, Percent_Identity=30.8510638297872, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1790524, Length=332, Percent_Identity=33.1325301204819, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788896, Length=332, Percent_Identity=31.9277108433735, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI145693152, Length=321, Percent_Identity=30.2180685358255, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787794, Length=304, Percent_Identity=31.9078947368421, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787793, Length=307, Percent_Identity=29.9674267100977, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87082395, Length=297, Percent_Identity=31.986531986532, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI145693214, Length=269, Percent_Identity=31.5985130111524, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 35491; Mature: 35359
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHH GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG HHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHH FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN HHHHHCHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYARKK HCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHH GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG HHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHH FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN HHHHHCHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYARKK HCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1719366; 9278503 [H]