| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yeiU [H]
Identifier: 82544607
GI number: 82544607
Start: 2125449
End: 2126198
Strand: Reverse
Name: yeiU [H]
Synonym: SBO_2150
Alternate gene names: 82544607
Gene position: 2126198-2125449 (Counterclockwise)
Preceding gene: 82544608
Following gene: 82544606
Centisome position: 47.04
GC content: 42.67
Gene sequence:
>750_bases TTGCCTGCGTTTTTCAGTAAGATAATTAGAGAAAATATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGG CCTCGCGCTGTTTCTTTCCTGGTATATTCCCGTTAATCATGGATTATGGTTGCCGATTGATGCGGATATTTTTTATTTCT TTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTATGGCTGGTTGCATTGACCAACAATCGCGCTTTCGACGGTTGTTCT CTGCTGGCGATGGGAATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCAGGCAGACGACGTATCGTGATTATTGG TCTGGTAATGCTATTAACTGCAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACGGGCCAGCCCAACAT TGACGTTTACTAATATTAACCGCGTCAGCGAACTGCTCTCTGTCCCCACGAAAGATGCCTCACGAGATAGCTTTCCCGGC GATCACGGCATGATGCTGCTTATTTTTTCGGCATTCATGTGGCGTTATTTCGGTAAAGTTGCAGGTCTTATCGCCCTTAT TATTTTTGTGGTTTTTGCGTTTCCCAGAGTAATGATTGGCGCACACTGGTTTACTGACATCATTGTCGGTTCGATGACCG TGATATTGATCGGTTTGCCCTGGGTGTTGCTGACGCCATTAAGTGATCGATTAATCACCTTTTTTGACAAATCACTACCA GGAAAAAACAAACATTTCCAAAACAAATAA
Upstream 100 bases:
>100_bases CACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGT TTAGCGACTACCGCGTAAGG
Downstream 100 bases:
>100_bases CTCACAGTAATTAACATCATCAGGGTTATTTTTATAGTGAGGATAATCCTGATGATGCGCACCGTGCTTTCATCTATCGA ACGCAAAAATCATTCTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MPAFFSKIIRENMIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCS LLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPG DHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLP GKNKHFQNK
Sequences:
>Translated_249_residues MPAFFSKIIRENMIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCS LLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPG DHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLP GKNKHFQNK >Mature_248_residues PAFFSKIIRENMIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSL LAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGD HGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPG KNKHFQNK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI87082062, Length=237, Percent_Identity=99.1561181434599, Blast_Score=471, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 28159; Mature: 28028
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFFSKIIRENMIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQKLVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH SKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQL HHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKV HHHHCCHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC GKNKHFQNK CCCCCCCCC >Mature Secondary Structure PAFFSKIIRENMIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQKLVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH SKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQL HHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKV HHHHCCHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC GKNKHFQNK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]