Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is 82544591

Identifier: 82544591

GI number: 82544591

Start: 2105231

End: 2105512

Strand: Reverse

Name: 82544591

Synonym: SBO_2132

Alternate gene names: NA

Gene position: 2105512-2105231 (Counterclockwise)

Preceding gene: 82544592

Following gene: 82544590

Centisome position: 46.58

GC content: 44.68

Gene sequence:

>282_bases
ATGACGCTAAAAATATTCTTGTTGCTGATTGTGAAAATGGGGGGGGTTATGCGTGATGATCGTTTTAATTCCCTGAAACA
GGAATTTCCCGGCGTTCCTGATGATGCGGCTGATGCGCTTTCGTCAATGCCAGAACTTATTAGAGCGGCTTTTTTCTTAC
TTTCCACGAGAGAATATAAATCAACGGGGCTTGATGTACTGAATATCGCCGCCGATTATGCGGAATATGTGGCAGAGGCG
CGTTACAGAAGAAAATTTCCTGAGGATGTAAGCCATGCGTGA

Upstream 100 bases:

>100_bases
GATATTGAATGCACTGCAGAGCTTGCGCAGGGAGAAGAACAGAAAGACCGGACACAGTTCGCCCTGGAATGTATCCGATA
CATCGCAACGCGGTCGCTGA

Downstream 100 bases:

>100_bases
TATTTACCACGAAACAATAGACCGCGCATTTCTTGCACTTTCTCACAGTGAAAACATGCTGGAAATATTGCGCATATGGC
TTGAAACACTTGGCGACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MTLKIFLLLIVKMGGVMRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYKSTGLDVLNIAADYAEYVAEA
RYRRKFPEDVSHA

Sequences:

>Translated_93_residues
MTLKIFLLLIVKMGGVMRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYKSTGLDVLNIAADYAEYVAEA
RYRRKFPEDVSHA
>Mature_92_residues
TLKIFLLLIVKMGGVMRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYKSTGLDVLNIAADYAEYVAEAR
YRRKFPEDVSHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10518; Mature: 10387

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKIFLLLIVKMGGVMRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLKIFLLLIVKMGGVMRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA