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The map label for this gene is 82544584

Identifier: 82544584

GI number: 82544584

Start: 2100297

End: 2101352

Strand: Reverse

Name: 82544584

Synonym: SBO_2125

Alternate gene names: NA

Gene position: 2101352-2100297 (Counterclockwise)

Preceding gene: 82544585

Following gene: 82544583

Centisome position: 46.49

GC content: 49.43

Gene sequence:

>1056_bases
ATGGCAGGCAAAGCAACGGCACTTAACACTAACCAGCTTTTTATGTACCTGAATCGCGGGGATATTGCGGATTTTAAATT
CAGCCCTCTGTTTACCACGCTGTTTTTCCCGAACGTGGCGACATTCAGCACGCAAAACATCATGCTGGATACCCTGGACA
TTGAAGAAGTCACCATGTCGGCGTTTTGTTCGCCTATGGTGGGTAGCCAGGTTCAGCGCGATAAAGGGTACGAAACCAGC
ACAATCAAACCTGGCTACATGAAGCCAAAGCACGAAATCGATCCAACGAAAACCATCATGCGCATGGCTGGAGAAGATCC
GGCACAGCTTAACGACCCTACCTATCGCCGTATGCGCCTGATTACTGGCAACATGCGCCGCCAGATAAACGCCATTAAGG
CACGCGTGGAATGGCTGGCGGTGAATGCGGTAACGACCGGAAAAAACATCATTGAGGGCGAAGGCATAGAACGCTATGAA
ATCGACTGGAAGATACCGGAAAAAAACATCATAGAGCAGTCCGACGGCAAAAAATGGTCCGAGCATGATAAAGATATTTA
CGATCCAATCTATGACATCGAACTATACGCAGATCAGGCAGGTTGCCCCGCCAACGTCATGATTATGGGCGCTGAGGTAT
GGCGCACGTTACGCAGCTTTAAAAAATTCCGTGAACTGTACGATCTTTCCCGTGGTTCAGAATCCGCCGCAGAAATGGCC
TGTAAAAACCTGGGCGAAGTGGTGAGCTTTAAAGGCTATCTGGGCGATATTGCTCTTATTGTCTATTCCGGCAAATACAC
TGACAGCGACGGCACCGAAAAATATTTCCTTGAGCCTGATTTGCTGGTCCTGGGCAACACCAACAATAAAGGGCTGGTGG
CCTATGGTGCGATTATGGATCAGGAAGCGGTAAGAACGGGCGCAACGCAAAACATGTACTACCCGAAAAACTGGATTGAG
GACGGCGATCCGGCGATTGAGTACGTGCAGACACACAGCGCACCGCAGCCGGTTCCGGCAGATATTCGCAAATTTGTTAC
CGTCAAAATTGGTTAA

Upstream 100 bases:

>100_bases
GACTGGATCCGCTGATGACGCCGGAGCCGTCGATAGGTTCACTTGTACGCTCTTATTTACTTGCGGCGCTTGGGATGCAT
AAAAATTATGGGGGTGAATA

Downstream 100 bases:

>100_bases
CGGGGGATTATATGGACACTCCATATATTGAGTTATTTGCAGGCAGTCAGCAGGTATCAACGACACTGGTACATTTTGCC
GCTGATGCTGGCGTTATTCA

Product: major capsid protein

Products: NA

Alternate protein names: Head protein gp7 [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFSTQNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETS
TIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAEMA
CKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIE
DGDPAIEYVQTHSAPQPVPADIRKFVTVKIG

Sequences:

>Translated_351_residues
MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFSTQNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETS
TIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAEMA
CKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIE
DGDPAIEYVQTHSAPQPVPADIRKFVTVKIG
>Mature_350_residues
AGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFSTQNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETST
IKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYEI
DWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAEMAC
KNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIED
GDPAIEYVQTHSAPQPVPADIRKFVTVKIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lambda phage gpE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005564 [H]

Pfam domain/function: PF03864 Phage_cap_E [H]

EC number: NA

Molecular weight: Translated: 39598; Mature: 39466

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFSTQNIMLDTLDIEEVTMS
CCCCCEEEECCEEEEEEECCCCCCEECCHHHHHHHCCCCEEECCCCEEEEECCHHHHHHH
AFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRL
HHHCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
ITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYEIDWKIPEKNIIEQSDGKKWS
HHHHHHHHHHHHHHEEEEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCH
EHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAEMA
HCCCHHHCCEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMD
HHHHHHHHHHCCCCCEEEEEEEECCEECCCCCEEEEECCCEEEEECCCCCCEEEEEEHHH
QEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSAPQPVPADIRKFVTVKIG
HHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCHHCEEEEEEEEC
>Mature Secondary Structure 
AGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFSTQNIMLDTLDIEEVTMS
CCCCEEEECCEEEEEEECCCCCCEECCHHHHHHHCCCCEEECCCCEEEEECCHHHHHHH
AFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRMAGEDPAQLNDPTYRRMRL
HHHCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
ITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYEIDWKIPEKNIIEQSDGKKWS
HHHHHHHHHHHHHHEEEEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCH
EHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLRSFKKFRELYDLSRGSESAAEMA
HCCCHHHCCEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYFLEPDLLVLGNTNNKGLVAYGAIMD
HHHHHHHHHHCCCCCEEEEEEEECCEECCCCCEEEEECCCEEEEECCCCCCEEEEEEHHH
QEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSAPQPVPADIRKFVTVKIG
HHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCHHCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]