| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is putP [H]
Identifier: 82544505
GI number: 82544505
Start: 2010028
End: 2011536
Strand: Reverse
Name: putP [H]
Synonym: SBO_2042
Alternate gene names: 82544505
Gene position: 2011536-2010028 (Counterclockwise)
Preceding gene: 82544507
Following gene: 82544504
Centisome position: 44.5
GC content: 53.81
Gene sequence:
>1509_bases ATGGCTATTAGCACACCGATGTTGGTGACATTTTGTGTCTATATCTTTGGCATGATATTGATTGGGTTTATCGCCTGGCG ATCAACGAAAAACTTTGACGACTATATTCTGGGCGGTCGTAGTCTTGGGCCATTTGTGACGGCATTATCGGCGGGTGCGT CGGATATGAGCGGCTGGCTGTTAATGGGGTTGCCTGGCGCGGTTTTTCTTTCCGGGATTTCCGAAAGCTGGATCGCCATT GGCCTGACATTAGGCGCGTGGATCAACTGGAAGCTGGTGGCCGGGCGGTTGCGTGTGCATACCGAATACAATAATAACGC CTTAACATTGCCGGATTATTTCACCGGGCGTTTTGAAGATAAAAGCCGCATTTTGCGCATTATCTCCGCGCTGGTTATTT TGCTGTTCTTCACCATTTATTGCGCTTCGGGCATTGTGGCAGGCGCGCGTCTGTTTGAAAGTACCTTTGGCATGAGCTAC GAAACGGCTCTGTGGGCGGGAGCTGCGGCGACGATCCTTTACACCTTTATTGGCGGTTTCCTCGCGGTGAGCTGGACTGA CACTGTACAGGCCAGCCTGATGATTTTTGCCCTGATCCTGACACCGGTTATCGTCATTATCAGTGTCGGTGGCTTTGGTG ACTCGCTGGAAGTGATCAAACAAAAGAGCATCGAAAACGTTGATATGCTCAAAGGTCTGAACTTTGTTGCCATTATCTCA CTGATGGGTTGGGGGCTGGGTTACTTCGGGCAGCCGCACATTCTGGCGCGTTTTATGGCGGCGGATTCTCACCACAGCAT TGTCCATGCGCGTCGTATCAGTATGACCTGGATGATCCTCTGCCTGGCAGGGGCGGTGGCTGTCGGCTTCTTTGGGATTG CTTACTTTAATGAGCACCCGGCGGTAGCAGGCGCGGTAAACCAGAACGCCGAGCGCGTGTTTATCGAACTGGCGCAAATT CTGTTTAACCCGTGGATTGCCGGGATTCTGCTGTCGGCAATTCTGGCGGCGGTAATGTCAACCTTAAGTTGCCAACTGCT GGTGTGCTCCAGTGCGATTACCGAAGATTTATACAAAGCGTTTCTGCGTAAACATGCCAGCCAGAAAGAGCTGGTGTGGG TAGGGCGTGTGATGGTGCTGGTGGTGGCGCTGGTGGCGATTGCGCTGGCGGCAAACCCGGAAAACCGCGTGCTGGGCTTA GTGAGCTACGCGTGGGCAGGCTTTGGCGCGGCGTTTGGTCCGGTGGTGCTGTTCTCGGTGATGTGGTCACGCATGACGCG TAACGGTGCACTGGCGGGGATGATCATCGGTGCGCTGACGGTTATCGTCTGGAAGCAGTTCGGCTGGCTGGGACTGTACG AAATTATTCCGGGCTTCATCTTCGGCAGTATCGGGATTGTAGTGTTTAGTTTGCTGGGTAAAGCGCCGTCAGCGGCGATG CAAAAACGCTTTGCCGAGGCCGATGCGCACTATCATTCGGCTCCGCCGTCACGGTTGCAGGAAAGCTAA
Upstream 100 bases:
>100_bases ACGGTCGCCCTGGTAAAAAATAAACTCTGTTACCCCGTTCCGGTTGCAGATATAACGGCAAGTTTCGACATTGCCGATAA TAATTTTTTGGAGACTTTAG
Downstream 100 bases:
>100_bases GGGACTTAGCCTGCGGCGGTTTTGTTTGGCTTCAGCAGCGGGTTGCGCTCCCTTAATGTGCCTCGCCATATAAATTGAAT GGTGCAGGGAGCGCGCAGGG
Product: major sodium/proline symporter
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAI GLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQI LFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGL VSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM QKRFAEADAHYHSAPPSRLQES
Sequences:
>Translated_502_residues MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAI GLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQI LFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGL VSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM QKRFAEADAHYHSAPPSRLQES >Mature_501_residues AISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIG LTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYE TALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIISL MGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQIL FNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLV SYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQ KRFAEADAHYHSAPPSRLQES
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=490, Percent_Identity=45.7142857142857, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI110835708, Length=491, Percent_Identity=24.6435845213849, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4507035, Length=374, Percent_Identity=22.7272727272727, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787251, Length=502, Percent_Identity=99.601593625498, Blast_Score=1001, Evalue=0.0, Organism=Escherichia coli, GI87082237, Length=460, Percent_Identity=27.3913043478261, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1790503, Length=451, Percent_Identity=26.6075388026608, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI115533094, Length=425, Percent_Identity=25.6470588235294, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221459584, Length=389, Percent_Identity=22.879177377892, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24645928, Length=357, Percent_Identity=25.7703081232493, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI221459588, Length=427, Percent_Identity=24.1217798594848, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651741, Length=370, Percent_Identity=23.5135135135135, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24650192, Length=402, Percent_Identity=21.6417910447761, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI221459582, Length=401, Percent_Identity=24.6882793017456, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI221459586, Length=378, Percent_Identity=22.4867724867725, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640370, Length=356, Percent_Identity=24.1573033707865, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24651739, Length=386, Percent_Identity=22.020725388601, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 54345; Mature: 54214
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEE LMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFED EECCCHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEEECCCEEECCCHHCCCCCC KSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS HEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHH LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHP HHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH MWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QKRFAEADAHYHSAPPSRLQES HHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure AISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEE LMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFED EECCCHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEEECCCEEECCCHHCCCCCC KSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS HEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHH LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHP HHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH MWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QKRFAEADAHYHSAPPSRLQES HHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]