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The map label for this gene is ycfR [H]

Identifier: 82544420

GI number: 82544420

Start: 1925209

End: 1925466

Strand: Reverse

Name: ycfR [H]

Synonym: SBO_1949

Alternate gene names: 82544420

Gene position: 1925466-1925209 (Counterclockwise)

Preceding gene: 82544422

Following gene: 82544416

Centisome position: 42.6

GC content: 46.51

Gene sequence:

>258_bases
ATGAAAAACGTAAAAACCCTCATCGCTGCGGCGATTTTAAGCTCCATGTCATTTGCCAGCTTTGCGGCTGTCGAAGTTCA
GTCAACGCCAGAAGGCCAACAAAAAGTCGGTACAATCAGTGCTAAAGCGGGGACAAATCTGGGATCGCTGGAAGAGCAGC
TGGCGCAAAAAGCGGATGAGATGGGTGCAAAATCTTTCCGTATTACTTCTGTAACCGGTCCGAATACCCTCCATGGAACA
GCAGTAATTTATAAATAA

Upstream 100 bases:

>100_bases
TAAAAAATATCTTGTATGTGATCCAGATCACATCTGTCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTC
ATCTGCATAAGGCCACTATT

Downstream 100 bases:

>100_bases
GCATTAACCCTCATTAATGCCTGCTACTGCTGATTTTTTCCCCGCGACATGCCGTGTCGCGGGGATTTTTTTTATCCAGG
ATTTACAGAGTTTGTGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK

Sequences:

>Translated_85_residues
MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK
>Mature_85_residues
MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK

Specific function: May be involved in the regulation of biofilm formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787355, Length=85, Percent_Identity=98.8235294117647, Blast_Score=169, Evalue=5e-44,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=43.0232558139535, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8829; Mature: 8829

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAGTNLGSLEEQLAQKADE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
MGAKSFRITSVTGPNTLHGTAVIYK
CCCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAGTNLGSLEEQLAQKADE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
MGAKSFRITSVTGPNTLHGTAVIYK
CCCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]