| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82544408
Identifier: 82544408
GI number: 82544408
Start: 1910546
End: 1910950
Strand: Direct
Name: 82544408
Synonym: SBO_1937
Alternate gene names: NA
Gene position: 1910546-1910950 (Clockwise)
Preceding gene: 82544403
Following gene: 82544409
Centisome position: 42.27
GC content: 48.4
Gene sequence:
>405_bases ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCGC TCGACGAGTGGAAACCAAAACGGTTCAGTCTCCCAATAACAAACACTACCCTGGTGAAATACGGAAAACTAGGATACATC GTTCCAAGACCACAAAAAATTCGTGGGCGTTGGCTGATAGATCGCCGAGCAGTATTTGTTGGGCCAGGTGAAACGGGAAT TGCGCCGGAAATTCATACTGGCGATGATGATGCACTGAAGGAGATTTTAACTCATGTCACCGAGGCCACGAAAAAACAGC ACTGA
Upstream 100 bases:
>100_bases CGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGT AGTTGCCATGTTTTACGGCA
Downstream 100 bases:
>100_bases CGTAGCCGGTCTTTACGAAAAGTTTGATCGCAGAACTGGCAGAGTTTACTACCAGTATAAAAATCCTGTGACTGGAAAAT TTCACGGACTCGGAACAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Excisionase For Prophage; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit; Excisionase For Bacteriophage Origin
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH
Sequences:
>Translated_134_residues MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH >Mature_134_residues MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14769; Mature: 14769
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPK CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC RFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALK EEECCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCEECCCHHHHH EILTHVTEATKKQH HHHHHHHHHHHCCC >Mature Secondary Structure MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPK CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC RFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALK EEECCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCEECCCHHHHH EILTHVTEATKKQH HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA