Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82544408

Identifier: 82544408

GI number: 82544408

Start: 1910546

End: 1910950

Strand: Direct

Name: 82544408

Synonym: SBO_1937

Alternate gene names: NA

Gene position: 1910546-1910950 (Clockwise)

Preceding gene: 82544403

Following gene: 82544409

Centisome position: 42.27

GC content: 48.4

Gene sequence:

>405_bases
ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC
ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCGC
TCGACGAGTGGAAACCAAAACGGTTCAGTCTCCCAATAACAAACACTACCCTGGTGAAATACGGAAAACTAGGATACATC
GTTCCAAGACCACAAAAAATTCGTGGGCGTTGGCTGATAGATCGCCGAGCAGTATTTGTTGGGCCAGGTGAAACGGGAAT
TGCGCCGGAAATTCATACTGGCGATGATGATGCACTGAAGGAGATTTTAACTCATGTCACCGAGGCCACGAAAAAACAGC
ACTGA

Upstream 100 bases:

>100_bases
CGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGT
AGTTGCCATGTTTTACGGCA

Downstream 100 bases:

>100_bases
CGTAGCCGGTCTTTACGAAAAGTTTGATCGCAGAACTGGCAGAGTTTACTACCAGTATAAAAATCCTGTGACTGGAAAAT
TTCACGGACTCGGAACAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Excisionase For Prophage; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit; Excisionase For Bacteriophage Origin

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI
VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH

Sequences:

>Translated_134_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI
VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH
>Mature_134_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPKRFSLPITNTTLVKYGKLGYI
VPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALKEILTHVTEATKKQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14769; Mature: 14769

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPK
CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
RFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALK
EEECCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCEECCCHHHHH
EILTHVTEATKKQH
HHHHHHHHHHHCCC
>Mature Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPLDEWKPK
CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
RFSLPITNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGDDDALK
EEECCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCEECCCHHHHH
EILTHVTEATKKQH
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA