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The map label for this gene is ymgD

Identifier: 82544372

GI number: 82544372

Start: 1880391

End: 1880597

Strand: Direct

Name: ymgD

Synonym: SBO_1898

Alternate gene names: 82544372

Gene position: 1880391-1880597 (Clockwise)

Preceding gene: 82544371

Following gene: 82544376

Centisome position: 41.6

GC content: 45.89

Gene sequence:

>207_bases
ATGGCAAAAACTGACAGCGCACAGGTTGCAGAAATTGTTGCGGTAATGGGTAATGCCAGCGTTGCCAGCCGTGATTTAAA
AATTGAGCAATCTCCGGAACTGAGCGCCAAAGTGGTAGAAAAACTGAATCAGGTTTGCGCTAAAGACCCGCAAATGCTGT
TGATCACGGCAATTGATGACACCATGCGTGCTATCGGCAAAAAATAA

Upstream 100 bases:

>100_bases
CGGGCCTGTTTGTTTTCGCACCAATGACCTGGGCGCAGGACTACATATTAAAAACGGTTTACCGTCAGAAACCTATATTA
CTTGCGCAGAAGCCAACGAA

Downstream 100 bases:

>100_bases
TATTTCATATGTACCGCGTCGATGAATACGACGCGGTTTTTTAGCTAACGGCGGGATCAGAACTTATATTTCAGGCCCAC
CATCACTGCGGTGTCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK

Sequences:

>Translated_68_residues
MAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
>Mature_67_residues
AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081849, Length=68, Percent_Identity=100, Blast_Score=135, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMGD_ECOL6 (P0AB47)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_753521.1
- EnsemblBacteria:   EBESCT00000044750
- GeneID:   1035381
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c1616
- GeneTree:   EBGT00050000009891
- HOGENOM:   HBG474473
- ProtClustDB:   CLSK905312

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7272; Mature: 7140

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDD
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCH
TMRAIGKK
HHHHHCCC
>Mature Secondary Structure 
AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCH
TMRAIGKK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157