Click here to switch to the map view.

The map label for this gene is 82544366

Identifier: 82544366

GI number: 82544366

Start: 1875997

End: 1876221

Strand: Direct

Name: 82544366

Synonym: SBO_1892

Alternate gene names: NA

Gene position: 1875997-1876221 (Clockwise)

Preceding gene: 82544363

Following gene: 82544368

Centisome position: 41.51

GC content: 46.22

Gene sequence:

>225_bases
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCGCCGAATAGAACATAATGTAAACAAGGCATCACTCACGACACATAAATAA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
CATCTTTGTGGTGATTTGATTGATTTTTCCACTCCGCTTACCATCCACACCAAAATAACGATCATCACGACATAATTTTT
CTTTAACATCGCAAAATACA

Product: IS1 encoded protein

Products: NA

Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRIEHNVNKASLTTHK

Sequences:

>Translated_74_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRIEHNVNKASLTTHK
>Mature_73_residues
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRIEHNVNKASLTTHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8008; Mature: 7877

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRR
CCCCHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IEHNVNKASLTTHK
HHCCCCCCEEECCC
>Mature Secondary Structure 
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRR
CCCHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IEHNVNKASLTTHK
HHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA