| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is dhaL
Identifier: 82544349
GI number: 82544349
Start: 1855091
End: 1855723
Strand: Direct
Name: dhaL
Synonym: SBO_1871
Alternate gene names: 82544349
Gene position: 1855091-1855723 (Clockwise)
Preceding gene: 82544348
Following gene: 82544350
Centisome position: 41.04
GC content: 53.71
Gene sequence:
>633_bases ATGTCACTGAGCAGAACTCAAATTGTTAACTGGCTCACTCGTTGTGGCGATATTTTCAGCACCGAGAGCGAGTATCTTAC CGGACTGGATCGCGAAATTGGCGACGCTGACCACGGGCTAAATATGAACCGAGGCTTTAGCAAAGTGGTGGAAAAACTCC CTGCTATCGCAGATAAAGATATCGGTTTCATTCTCAAGAATACCGGTATGACGCTGCTTTCCAGCGTCGGTGGTGCCAGT GGTCCGCTGTTCGGTACCTTCTTTATCCGCGCCGCACAGGCGACCCAGGCACGGCAAAGCCTGACACTGGAAGAGCTTTA TCAGATGTTCCGCGATGGCGCGGACGGCGTAATCAGTCGCGGGAAAGCCGAACCTGGCGATAAAACCATGTGTGATGTGT GGGTGCCGGTGGTGGAATCGTTACGTCAGTCCAGCGAGCAAAATCTCTCTGTTCCGGTGGCGCTCGAAGCTGCCAGTAGC ATCGCCGAATCCGCTGCACAAAGTACGATTACGATGCAAGCCCGCAAAGGCCGCGCCAGTTATCTCGGTGAACGCAGTAT TGGTCACCAGGATCCCGGCGCGACCTCGGTGATGTTTATGATGCAAATGTTGGCGTTAGCCGCAAAAGAGTAA
Upstream 100 bases:
>100_bases TTCTCAATCACCTTACTGAAAGTTGATGACGAAACGCTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTG GGATAAATTAGGAGAAAGCA
Downstream 100 bases:
>100_bases GGAATTGGTGATGGTAAACCTGGTCATAGTTTCACATAGCAGCCGACTGGGAGAAGGTGTCGGTGAATTAGCCCGTCAGA TGTTAATGAGTGATAGTTGT
Product: dihydroxyacetone kinase subunit DhaL
Products: ADP; glycerone phosphate
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGAS GPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE
Sequences:
>Translated_210_residues MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGAS GPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE >Mature_209_residues SLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASG PLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSI AESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE
Specific function: ADP-binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. DhaL- ADP receives a phosphoryl group from dhaM and transmits it to dihydroxyacetone. DhaL-ADP acts also as a coactivator by binding to the sens
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain
Homologues:
Organism=Homo sapiens, GI20149621, Length=182, Percent_Identity=32.967032967033, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1787449, Length=210, Percent_Identity=100, Blast_Score=432, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DHAL_ECOLI (P76014)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: D64866 - RefSeq: AP_001824.1 - RefSeq: NP_415717.1 - PDB: 2BTD - PDBsum: 2BTD - ProteinModelPortal: P76014 - SMR: P76014 - STRING: P76014 - EnsemblBacteria: EBESCT00000000403 - EnsemblBacteria: EBESCT00000016367 - GeneID: 945748 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW5186 - KEGG: eco:b1199 - EchoBASE: EB3659 - EcoGene: EG13900 - eggNOG: COG2376 - GeneTree: EBGT00050000009463 - HOGENOM: HBG579729 - OMA: VWIPVIE - ProtClustDB: PRK10005 - BioCyc: EcoCyc:MONOMER0-1261 - BioCyc: MetaCyc:MONOMER0-1261 - BRENDA: 2.7.1.29 - Genevestigator: P76014 - InterPro: IPR004007 - InterPro: IPR012737 - TIGRFAMs: TIGR02365
Pfam domain/function: PF02734 Dak2; SSF101473 Dak2
EC number: 2.7.1.29
Molecular weight: Translated: 22632; Mature: 22501
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS51480 DHAL
Important sites: BINDING 121-121 BINDING 178-178
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKD CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC IGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISR CHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHC GKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRAS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH YLGERSIGHQDPGATSVMFMMQMLALAAKE HHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKD CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC IGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISR CHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHC GKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRAS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH YLGERSIGHQDPGATSVMFMMQMLALAAKE HHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123