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The map label for this gene is ldrA [H]

Identifier: 82544330

GI number: 82544330

Start: 1833215

End: 1833490

Strand: Direct

Name: ldrA [H]

Synonym: SBO_1851

Alternate gene names: 82544330

Gene position: 1833215-1833490 (Clockwise)

Preceding gene: 82544329

Following gene: 82544337

Centisome position: 40.56

GC content: 51.09

Gene sequence:

>276_bases
GTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTT
TAACCTGACAATAGAACGGGGGCTAATCTTGAAACCAGAACAATTCAAGAATAGCCGCAAAATGTTATCATTACAACAAG
GCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACC
GCAGCGATTGTCGGCTGGTGGCGTAACCGGAAGTAA

Upstream 100 bases:

>100_bases
AGCTGTTGAAAAACCGGAATGCACTCTTCATTGCAAACATTTCAGGGATGAAGTGAAGATGAATTGAGACGTAGTATCCA
CATCAAGCCGGCGTTATCCG

Downstream 100 bases:

>100_bases
GGTGAAAACGGGCGTCAGGCTGCCGTGATGGCAATATGCGCCCGAAACCGGCCGCAGGGGTAACAGCCTGCGGCCTTTTT
TGTATCTGGCACCCATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MRRNVAGALSLVALVAGKRKPPHVERFNLTIERGLILKPEQFKNSRKMLSLQQGGYMTLAQFAMIFWHDLAAPILAGIIT
AAIVGWWRNRK

Sequences:

>Translated_91_residues
MRRNVAGALSLVALVAGKRKPPHVERFNLTIERGLILKPEQFKNSRKMLSLQQGGYMTLAQFAMIFWHDLAAPILAGIIT
AAIVGWWRNRK
>Mature_91_residues
MRRNVAGALSLVALVAGKRKPPHVERFNLTIERGLILKPEQFKNSRKMLSLQQGGYMTLAQFAMIFWHDLAAPILAGIIT
AAIVGWWRNRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994881, Length=35, Percent_Identity=97.1428571428571, Blast_Score=73, Evalue=4e-15,
Organism=Escherichia coli, GI48994882, Length=35, Percent_Identity=97.1428571428571, Blast_Score=73, Evalue=4e-15,
Organism=Escherichia coli, GI48994880, Length=35, Percent_Identity=97.1428571428571, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10284; Mature: 10284

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNVAGALSLVALVAGKRKPPHVERFNLTIERGLILKPEQFKNSRKMLSLQQGGYMTLA
CCCCHHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEECCHHHHCHHHHHHHCCCCCHHHH
QFAMIFWHDLAAPILAGIITAAIVGWWRNRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRNVAGALSLVALVAGKRKPPHVERFNLTIERGLILKPEQFKNSRKMLSLQQGGYMTLA
CCCCHHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEECCHHHHCHHHHHHHCCCCCHHHH
QFAMIFWHDLAAPILAGIITAAIVGWWRNRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]