| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is trpE [H]
Identifier: 82544282
GI number: 82544282
Start: 1780755
End: 1782317
Strand: Direct
Name: trpE [H]
Synonym: SBO_1802
Alternate gene names: 82544282
Gene position: 1780755-1782317 (Clockwise)
Preceding gene: 82544281
Following gene: 82544283
Centisome position: 39.4
GC content: 55.02
Gene sequence:
>1563_bases ATGCAAACACAAAAACCGACTCTCGAACTGCTAACCTGCGAAGGCGCTTATCGCGACAACCCGACTGCGCTTTTTCACCA GTTGTGTGGGGATCGTCCGGCAACGCTGCTGCTGGAATCCGCAGATATCGACAGCAAAGATGATTTAAAAAGCCTGCTAC TGGTAGACAGTGCGCTGCGCATTACAGCATTAGGTGACACTGTCACAATTCAGGCACTTTCCGGCAACGGCGAAGCCCTG CTGACACTACTGGATAACGCCCTGCCTGCGGGTGTGGAAAATGAACAATCACCAAACTGCCGTGTGCTGCGCTTCCCCCC TGTCAGTCCACTGCTGGATGAAGACGCTCGCTTATGCTCCCTTTCGGTTTTTGACGCTTTCCGTTTATTGCAGAATCTGT TGAATGTACCGAAGGAAGAACGAGAAGCAATGTTCTTCGGCGGCCTGTTCTCTTATGACCTTGTGGCGGGATTTGAAGAT TTACCGCAACTGTCAGCGGAAAATAACTGCCCTGATTTCTGTTTTTATCTCGCTGAAACGCTGATGGTGATTGACCATCA GAAAAAAAACACCCGCATTCAGGCCAGCCTGTTTGCTCCGAATGAAGAAGAAAAACAACGTCTCACTGCTCGCCTGAACG ATCTTCGCCAGCAGCTGACCGAAGCCGCGCCGCCGCTGCCGGTGGTTTCCGTGCCGCATATGCGTTGTGAATGTAACCAG AGCGATGAAGAGTTCGGTGGCGTGGTGCGTTTGTTGCAAAAAGCGATTCGCACCGGAGAAATTTTCCAGGTGGTGCCGTC TCGCCGTTTCTCTCTGCCCTGCCCGTCACCGCTGGCGGCCTATTACGTGCTGAAAAAGAGTAATCCCTGCCCGTACATGT TTTTTATGCAGGATAATGATTTCACCCTGTTTGGCGCGTCGCCGGAAAGTTCGCTCAAGTATGACGCCACCAGCCGCCAG ATTGAGATCTACCCGATTGCCGGAACACGCCCGCGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGACCTCGACAGCCG CATCGAACTGGAAATGCGTACCGATCATAAAGAGCTTTCTGAACATCTGATGCTGGTGGATCTCGCCCGTAATGATCTGG CACGCATTTGCACCCCCGGCAGCCGCTACGTCGCCGATCTTACCAAAGTTGACCGTTACTCTTACGTGATGCACCTGGTC TCCCGCGTGGTCGGTGAGCTGCGCCACGATCTCGACGCCCTGCACGCTTACCGCGCCTGTATGAATATGGGGACGTTAAG CGGTGCGCCGAAAGTACGCGCCATGCAGTTAATTGCCGAGGCGGAAGGTCGTCGCCGCGGCAGCTACGGCGGCGCGGTAG GTTATTTCACCGCGCATGGCGATCTCGACACCTGCATTGTGATCCGCTCGGCGCTGGTGGAAAACGGTATCGCCACCGTG CAAGCCGGTGCTGGCATAGTCCTTGATTCTGTTCCGCAGTCGGAAGCCGACGAAACCCGTAATAAAGCCCGCGCTGTACT GCGCGCTATTGCCACCGCGCATCATGCACAGGAGACTTTCTGA
Upstream 100 bases:
>100_bases ACTTCCTGAAACGGGCAGTGTATTCACCATGCGTAAAGCAATCAGATACCCAGCCCGCCTAATGAGCGGGCTTTTTTTTG AACAAAATTAGAGAATAACA
Downstream 100 bases:
>100_bases TGGCTGACATTCTGCTGCTCGATAATATCGACTCTTTTACGTACAACCTGGCAGATCAGTTGCGCAGCAATGGGCATAAT GTGGTGATTTACCGCAACCA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQALSGNGEAL LTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPCPYMFFMQDNDFTLFGASPESSLKYDATSRQ IEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLV SRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQETF
Sequences:
>Translated_520_residues MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQALSGNGEAL LTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPCPYMFFMQDNDFTLFGASPESSLKYDATSRQ IEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLV SRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQETF >Mature_520_residues MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQALSGNGEAL LTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPCPYMFFMQDNDFTLFGASPESSLKYDATSRQ IEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLV SRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQETF
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=520, Percent_Identity=98.6538461538462, Blast_Score=1054, Evalue=0.0, Organism=Escherichia coli, GI1788114, Length=422, Percent_Identity=29.8578199052133, Blast_Score=175, Evalue=6e-45, Organism=Escherichia coli, GI87082077, Length=299, Percent_Identity=28.0936454849498, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786809, Length=256, Percent_Identity=28.125, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=399, Percent_Identity=37.0927318295739, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6324361, Length=274, Percent_Identity=28.4671532846715, Blast_Score=85, Evalue=3e-17,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 57625; Mature: 57625
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALR CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCEE ITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCS EEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHH LSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFEDLPQLSAENNCPDFCFYLAET HHHHHHHHHHHHHHCCCHHHHCEEEECCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHH LMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQLTEAAPPLPVVSVPHMRCECNQ HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEECCCC SDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPCPYMFFMQDND CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCC FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EEEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEE QAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQETF ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALR CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCEE ITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCS EEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHH LSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFEDLPQLSAENNCPDFCFYLAET HHHHHHHHHHHHHHCCCHHHHCEEEECCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHH LMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQLTEAAPPLPVVSVPHMRCECNQ HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEECCCC SDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPCPYMFFMQDND CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCC FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EEEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEE QAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQETF ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7038627; 7021857; 9097039; 9278503; 351195; 4598537 [H]