Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ordL [H]

Identifier: 82544243

GI number: 82544243

Start: 1736822

End: 1738054

Strand: Reverse

Name: ordL [H]

Synonym: SBO_1761

Alternate gene names: 82544243

Gene position: 1738054-1736822 (Counterclockwise)

Preceding gene: 82544244

Following gene: 82544242

Centisome position: 38.45

GC content: 58.64

Gene sequence:

>1233_bases
GTGCCATTCGACACCCTGAATGAGTCAATCACCTGCGACGTTTGCGTGGTTGGCGGCGGCTATACCGGGCTCTCCTCCGC
GCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAATG
GCGGGCAGCTTGTGAACTCCTACAACCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCCTATGCTC
GGCAGCATGATGTTCGAAGGTGGTGAGATCATCCGCGAACGTATCAAACGTTATCAGATTGACTGCGACTACCGCCCCGG
CAGCCTGTTTGTGGCGATGAATGATAAACAGCTCGCCACACTTGAAGAGCAGAAAGAGAACTGGGAACGCTACGGCAATA
AACAGCTGGAATTGCTGGACGCCAACGCCATTCGCCGTGAAGTAGCCAGCGATCGCTATACCGGTGCGCTGCTGGATCAC
AGCGGTGGGCATATTCACCCACTAAACCTCGCCATTGGCGAAGCGGACGCCATCCGCCTCAACGGCGGGCGCGTGTATGA
ACTTTCTGCCGTGACGCAGATCCAGCACACCACGCCAGCCGTTGTGCGCACTGCCAAAGGTCAGGTGACGGCGAAGTATG
TGATTGTCGCCGGGAATGCGTATCTGGGCGATAAAGTAGAGCCGGAACTGGCGAAACGCAGCATGCCGTGCGGCACGCAG
GTGATCACCACCGAACGGCTGTCGGAAGATTTAGCCCGTTCGCTGATCCCGAAAAACTACTGTGTGGAAGACTGTAATTA
TCTGCTTGATTACTACCGTCTTACCGCCGACAACCGTTTGCTGTACGGCGGCGGCGTGGTCTACGGCGCGCGCGACCCGG
ATGACGTTGAGCGTCTTGTTGTGCCGAAACTGCTGAAAACCTTCCCGCAGCTGAAGGGCGTCAAAATCGACTATCGCTGG
ACGGGCAACTTCCTGCTGACCCTTTCACGGATGCCGCAGTTCGGTCGCCTCGATACCAACATCTATTACATGCAGGGCTA
CAGCGGCCACGGCGTCACCTGTACCCACCTCGCCGGGCGTTTGATTGCTGAACTGCTGCGCGGTGACGCCGAGCGTTTCG
ATGCCTTCGCCAATCTGCCGCATTACCCGTTCCCCGGCGGGCGCACGCTGCGCGTGCCATTTACCGCGATGGGCGCGGCT
TATTACAGCCTGCGCGATCGTCTGGGCGTTTAA

Upstream 100 bases:

>100_bases
CCCTGCATGCCCTTGAAAAATTCACCGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGAAATGACCGAACATACCAG
CAGTTATTACGCATAAATAC

Downstream 100 bases:

>100_bases
TTTCCGATTAACAGTGAAGAGTCAAAAGGTGTGAAACATGAGCAACAATGAATTCCATCAGCGTCGTCTTTCTGCTACCC
CACGCGGGGTTGGCGTGATG

Product: oxidoreductase

Products: NA

Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPML
GSMMFEGGEIIRERIKRYQIDCDYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDH
SGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQ
VITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRW
TGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAA
YYSLRDRLGV

Sequences:

>Translated_410_residues
MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPML
GSMMFEGGEIIRERIKRYQIDCDYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDH
SGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQ
VITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRW
TGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAA
YYSLRDRLGV
>Mature_409_residues
PFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPMLG
SMMFEGGEIIRERIKRYQIDCDYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHS
GGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQV
ITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWT
GNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAY
YSLRDRLGV

Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=409, Percent_Identity=99.2665036674817, Blast_Score=837, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45422; Mature: 45291

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNS
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHH
YNRDIDVIEKSYGMDTAPMLGSMMFEGGEIIRERIKRYQIDCDYRPGSLFVAMNDKQLAT
CCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCEEEEEECCCHHHH
LEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRL
HHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCEEEE
NGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQ
CCCEEEEEEHHHHHCCCCHHHEEECCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCE
VITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLV
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECEEEECCCCHHHHHHHH
VPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGR
HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
LIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV
HHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNS
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHH
YNRDIDVIEKSYGMDTAPMLGSMMFEGGEIIRERIKRYQIDCDYRPGSLFVAMNDKQLAT
CCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCEEEEEECCCHHHH
LEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRL
HHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCEEEE
NGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQ
CCCEEEEEEHHHHHCCCCHHHEEECCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCE
VITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLV
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECEEEECCCCHHHHHHHH
VPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGR
HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
LIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV
HHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553; 7984428 [H]